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Iron in PDB 1ymc: Three-Dimensional Structure of Cyanomet-Sulfmyoglobin C

Protein crystallography data

The structure of Three-Dimensional Structure of Cyanomet-Sulfmyoglobin C, PDB code: 1ymc was solved by S.V.Evans, G.D.Brayer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 6.00 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 64.500, 28.910, 35.660, 90.00, 107.00, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Three-Dimensional Structure of Cyanomet-Sulfmyoglobin C (pdb code 1ymc). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Three-Dimensional Structure of Cyanomet-Sulfmyoglobin C, PDB code: 1ymc:

Iron binding site 1 out of 1 in 1ymc

Go back to Iron Binding Sites List in 1ymc
Iron binding site 1 out of 1 in the Three-Dimensional Structure of Cyanomet-Sulfmyoglobin C


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Three-Dimensional Structure of Cyanomet-Sulfmyoglobin C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe154

b:17.4
occ:1.00
FE A:CLN154 0.0 17.4 1.0
ND A:CLN154 2.0 17.8 1.0
NB A:CLN154 2.0 18.1 1.0
NA A:CLN154 2.1 16.9 1.0
NC A:CLN154 2.1 19.2 1.0
C A:CYN156 2.1 15.8 1.0
NE2 A:HIS93 2.1 8.2 1.0
N A:CYN156 3.0 14.5 1.0
CD2 A:HIS93 3.0 8.2 1.0
C1D A:CLN154 3.0 18.2 1.0
C4B A:CLN154 3.0 18.0 1.0
C4D A:CLN154 3.0 18.0 1.0
C1B A:CLN154 3.1 17.5 1.0
C4A A:CLN154 3.1 16.5 1.0
C4C A:CLN154 3.1 19.5 1.0
C1A A:CLN154 3.1 16.4 1.0
C1C A:CLN154 3.2 19.6 1.0
CE1 A:HIS93 3.2 8.9 1.0
CHC A:CLN154 3.4 18.6 1.0
CHD A:CLN154 3.4 19.3 1.0
CHB A:CLN154 3.4 17.4 1.0
CHA A:CLN154 3.4 17.0 1.0
CG A:HIS93 4.2 10.3 1.0
C2D A:CLN154 4.2 18.4 1.0
C3D A:CLN154 4.2 18.3 1.0
C3B A:CLN154 4.2 18.3 1.0
C2B A:CLN154 4.3 18.3 1.0
ND1 A:HIS93 4.3 6.1 1.0
C3C A:CLN154 4.3 20.0 1.0
C2A A:CLN154 4.3 15.9 1.0
C3A A:CLN154 4.4 15.9 1.0
C2C A:CLN154 4.5 19.8 1.0
O A:HOH242 4.7 71.3 1.0
NE2 A:HIS64 4.8 7.9 1.0
O A:HOH223 4.9 59.8 1.0
CE1 A:HIS64 4.9 6.0 1.0

Reference:

S.V.Evans, B.P.Sishta, A.G.Mauk, G.D.Brayer. Three-Dimensional Structure of Cyanomet-Sulfmyoglobin C. Proc.Natl.Acad.Sci.Usa V. 91 4723 1994.
ISSN: ISSN 0027-8424
PubMed: 8197124
DOI: 10.1073/PNAS.91.11.4723
Page generated: Sat Aug 3 17:53:38 2024

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