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Iron in PDB 2bv0: Crystal Structure of Protocatechuate 3,4-Dioxygenase From Acinetobacter Sp. ADP1 Mutant R133H in Complex with Protocatechuate.

Enzymatic activity of Crystal Structure of Protocatechuate 3,4-Dioxygenase From Acinetobacter Sp. ADP1 Mutant R133H in Complex with Protocatechuate.

All present enzymatic activity of Crystal Structure of Protocatechuate 3,4-Dioxygenase From Acinetobacter Sp. ADP1 Mutant R133H in Complex with Protocatechuate.:
1.13.11.3;

Protein crystallography data

The structure of Crystal Structure of Protocatechuate 3,4-Dioxygenase From Acinetobacter Sp. ADP1 Mutant R133H in Complex with Protocatechuate., PDB code: 2bv0 was solved by M.W.Vetting, M.P.Valley, D.A.D'argenio, L.N.Ornston, J.D.Lipscomb, D.H.Ohlendorf, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.80
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 144.950, 144.950, 144.950, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 19.2

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Protocatechuate 3,4-Dioxygenase From Acinetobacter Sp. ADP1 Mutant R133H in Complex with Protocatechuate. (pdb code 2bv0). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Protocatechuate 3,4-Dioxygenase From Acinetobacter Sp. ADP1 Mutant R133H in Complex with Protocatechuate., PDB code: 2bv0:

Iron binding site 1 out of 1 in 2bv0

Go back to Iron Binding Sites List in 2bv0
Iron binding site 1 out of 1 in the Crystal Structure of Protocatechuate 3,4-Dioxygenase From Acinetobacter Sp. ADP1 Mutant R133H in Complex with Protocatechuate.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Protocatechuate 3,4-Dioxygenase From Acinetobacter Sp. ADP1 Mutant R133H in Complex with Protocatechuate. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe600

b:26.1
occ:1.00
 OH B:TYR408 1.9 23.8 1.0
OH B:TYR447 2.0 30.4 1.0
NE2 B:HIS462 2.1 16.4 1.0
O3 B:DHB999 2.2 47.5 1.0
NE2 B:HIS460 2.2 14.3 1.0
O4 B:DHB999 2.6 46.4 1.0
CE1 B:HIS462 3.0 17.1 1.0
C3 B:DHB999 3.0 48.3 1.0
CZ B:TYR408 3.0 22.9 1.0
CE1 B:HIS460 3.1 15.3 1.0
C4 B:DHB999 3.1 47.2 1.0
CD2 B:HIS462 3.2 18.1 1.0
CD2 B:HIS460 3.3 15.5 1.0
CZ B:TYR447 3.3 30.4 1.0
CE2 B:TYR408 3.7 23.1 1.0
CE2 B:TYR447 3.8 30.7 1.0
CE1 B:TYR408 4.0 22.6 1.0
O B:HOH2111 4.2 18.7 1.0
ND1 B:HIS462 4.2 17.0 1.0
ND1 B:HIS460 4.2 14.8 1.0
O A:HOH2010 4.2 20.1 1.0
C2 B:DHB999 4.2 48.7 1.0
CG B:HIS462 4.3 16.8 1.0
NH1 B:ARG457 4.3 17.8 1.0
CG B:HIS460 4.4 14.2 1.0
O B:HOH2161 4.4 29.8 1.0
C5 B:DHB999 4.5 47.9 1.0
CE1 B:TYR447 4.5 29.4 1.0
NE2 B:GLN477 5.0 19.0 1.0
CD2 B:TYR408 5.0 23.3 1.0

Reference:

M.W.Vetting, M.W.Vetting, M.P.Valley, D.A.D'argenio, L.N.Ornston, J.D.Lipscomb, D.H.Ohlendorf. N/A N/A.
Page generated: Thu Jul 17 00:04:21 2025

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