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Iron in PDB 2cyp: Crystal Structure of Yeast Cytochrome C Peroxidase Refined at 1.7- Angstroms Resolution

Enzymatic activity of Crystal Structure of Yeast Cytochrome C Peroxidase Refined at 1.7- Angstroms Resolution

All present enzymatic activity of Crystal Structure of Yeast Cytochrome C Peroxidase Refined at 1.7- Angstroms Resolution:
1.11.1.5;

Protein crystallography data

The structure of Crystal Structure of Yeast Cytochrome C Peroxidase Refined at 1.7- Angstroms Resolution, PDB code: 2cyp was solved by B.C.Finzel, T.L.Poulos, J.Kraut, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 107.400, 76.800, 51.400, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Yeast Cytochrome C Peroxidase Refined at 1.7- Angstroms Resolution (pdb code 2cyp). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Yeast Cytochrome C Peroxidase Refined at 1.7- Angstroms Resolution, PDB code: 2cyp:

Iron binding site 1 out of 1 in 2cyp

Go back to Iron Binding Sites List in 2cyp
Iron binding site 1 out of 1 in the Crystal Structure of Yeast Cytochrome C Peroxidase Refined at 1.7- Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Yeast Cytochrome C Peroxidase Refined at 1.7- Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe295

b:26.0
occ:1.00
FE A:HEM295 0.0 26.0 1.0
NE2 A:HIS175 2.0 20.0 1.0
NB A:HEM295 2.0 24.7 1.0
NA A:HEM295 2.0 25.2 1.0
NC A:HEM295 2.0 22.0 1.0
ND A:HEM295 2.0 22.9 1.0
O A:O296 2.4 34.2 0.8
CE1 A:HIS175 2.8 21.4 1.0
C4B A:HEM295 3.0 23.2 1.0
C1B A:HEM295 3.0 23.6 1.0
C4A A:HEM295 3.0 21.9 1.0
C1D A:HEM295 3.0 20.0 1.0
C1C A:HEM295 3.0 21.3 1.0
C4C A:HEM295 3.0 21.6 1.0
C1A A:HEM295 3.1 24.6 1.0
CD2 A:HIS175 3.1 21.1 1.0
C4D A:HEM295 3.1 19.7 1.0
CHD A:HEM295 3.4 19.2 1.0
CHB A:HEM295 3.4 23.4 1.0
CHC A:HEM295 3.4 20.2 1.0
CHA A:HEM295 3.5 22.3 1.0
ND1 A:HIS175 4.0 22.1 1.0
NE1 A:TRP51 4.1 23.5 1.0
CG A:HIS175 4.2 23.6 1.0
C3A A:HEM295 4.2 23.0 1.0
C2B A:HEM295 4.2 22.3 1.0
C3B A:HEM295 4.2 22.7 1.0
C3D A:HEM295 4.2 19.3 1.0
C2D A:HEM295 4.2 21.0 1.0
C2A A:HEM295 4.3 23.6 1.0
C2C A:HEM295 4.3 20.5 1.0
C3C A:HEM295 4.3 20.6 1.0
O A:HOH596 4.3 35.0 1.0
CD1 A:TRP51 4.5 23.6 1.0
O A:HOH648 4.8 41.5 0.8

Reference:

B.C.Finzel, T.L.Poulos, J.Kraut. Crystal Structure of Yeast Cytochrome C Peroxidase Refined at 1.7-A Resolution J.Biol.Chem. V. 259 13027 1984.
ISSN: ISSN 0021-9258
PubMed: 6092361
Page generated: Sat Aug 3 20:33:19 2024

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