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Iron in PDB 2cz0: Photo-Activation State of Fe-Type Nhase in Aerobic Condition

Enzymatic activity of Photo-Activation State of Fe-Type Nhase in Aerobic Condition

All present enzymatic activity of Photo-Activation State of Fe-Type Nhase in Aerobic Condition:
4.2.1.84;

Protein crystallography data

The structure of Photo-Activation State of Fe-Type Nhase in Aerobic Condition, PDB code: 2cz0 was solved by Y.Kawano, K.Hashimoto, M.Odaka, H.Nakayama, K.Takio, I.Endo, N.Kamiya, Riken Structural Genomics/Proteomics Initiative(Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.50
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 114.016, 60.182, 81.573, 90.00, 125.15, 90.00
R / Rfree (%) 17.3 / 21.4

Iron Binding Sites:

The binding sites of Iron atom in the Photo-Activation State of Fe-Type Nhase in Aerobic Condition (pdb code 2cz0). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Photo-Activation State of Fe-Type Nhase in Aerobic Condition, PDB code: 2cz0:

Iron binding site 1 out of 1 in 2cz0

Go back to Iron Binding Sites List in 2cz0
Iron binding site 1 out of 1 in the Photo-Activation State of Fe-Type Nhase in Aerobic Condition


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Photo-Activation State of Fe-Type Nhase in Aerobic Condition within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe300

b:9.0
occ:1.00
N A:CSD114 2.0 6.9 1.0
N A:SER113 2.0 7.4 1.0
O A:HOH1302 2.0 8.9 1.0
SG A:CSD114 2.2 8.9 1.0
SG A:CSD112 2.2 7.9 1.0
SG A:CYS109 2.3 8.6 1.0
C A:SER113 2.8 10.3 1.0
CA A:SER113 2.9 7.1 1.0
CA A:CSD114 3.0 7.8 1.0
OD2 A:CSD112 3.0 9.4 1.0
CB A:CSD114 3.1 8.5 1.0
C A:CSD112 3.1 5.2 1.0
OD1 A:CSD114 3.1 11.0 1.0
CB A:CSD112 3.1 7.5 1.0
OD2 A:CSD114 3.2 12.6 1.0
OD1 A:CSD112 3.2 8.8 1.0
CB A:CYS109 3.3 7.3 1.0
CA A:CSD112 3.5 5.8 1.0
OG A:SER113 3.8 11.1 1.0
N A:CSD112 3.9 6.1 1.0
CB A:SER113 3.9 7.5 1.0
O A:SER113 4.0 8.0 1.0
O A:CSD112 4.2 7.8 1.0
C A:CSD114 4.3 11.5 1.0
CA A:CYS109 4.7 7.5 1.0
O2 A:BUA1301 4.7 13.7 0.6
O A:CSD114 4.8 8.0 1.0
O A:HOH1340 4.8 18.0 1.0
O A:CYS109 4.8 8.1 1.0
NH2 B:ARG141 4.8 8.4 1.0
C A:LEU111 4.9 5.9 1.0
O A:THR162 5.0 14.5 1.0

Reference:

Y.Kawano, K.Hashimoto, M.Odaka, H.Nakayama, K.Takio, I.Endo, N.Kamiya. Photo-Activation State of Fe-Type Nhase in Aerobic Condition To Be Published.
Page generated: Sat Aug 3 20:33:55 2024

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