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Iron in PDB 2cz7: Fe-Type Nhase Photo-Activated For 75MIN at 105K

Enzymatic activity of Fe-Type Nhase Photo-Activated For 75MIN at 105K

All present enzymatic activity of Fe-Type Nhase Photo-Activated For 75MIN at 105K:
4.2.1.84;

Protein crystallography data

The structure of Fe-Type Nhase Photo-Activated For 75MIN at 105K, PDB code: 2cz7 was solved by M.Nojiri, Y.Kawano, K.Hashimoto, N.Kamiya, Riken Structuralgenomics/Proteomics Initiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.77 / 1.80
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 114.798, 60.384, 81.804, 90.00, 124.98, 90.00
R / Rfree (%) 14.3 / 15.3

Other elements in 2cz7:

The structure of Fe-Type Nhase Photo-Activated For 75MIN at 105K also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Fe-Type Nhase Photo-Activated For 75MIN at 105K (pdb code 2cz7). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Fe-Type Nhase Photo-Activated For 75MIN at 105K, PDB code: 2cz7:

Iron binding site 1 out of 1 in 2cz7

Go back to Iron Binding Sites List in 2cz7
Iron binding site 1 out of 1 in the Fe-Type Nhase Photo-Activated For 75MIN at 105K


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Fe-Type Nhase Photo-Activated For 75MIN at 105K within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe300

b:10.3
occ:1.00
N A:NO301 1.8 24.5 1.0
N A:CSO114 2.0 9.3 1.0
N A:SER113 2.1 9.2 1.0
SG A:CSD112 2.2 9.3 1.0
SG A:CYS109 2.3 8.9 1.0
SG A:CSO114 2.4 11.8 1.0
C A:SER113 2.8 8.9 1.0
CA A:SER113 2.9 9.8 1.0
O A:NO301 2.9 29.3 1.0
OD A:CSO114 3.0 20.7 1.0
CA A:CSO114 3.0 10.2 1.0
CB A:CSO114 3.1 10.0 1.0
C A:CSD112 3.1 8.9 1.0
OD1 A:CSD112 3.1 11.8 1.0
OD2 A:CSD112 3.2 10.1 1.0
CB A:CSD112 3.2 9.2 1.0
CB A:CYS109 3.3 6.5 1.0
CA A:CSD112 3.5 8.1 1.0
N A:CSD112 3.8 7.5 1.0
OG A:SER113 3.9 18.2 1.0
CB A:SER113 4.0 11.3 1.0
O A:SER113 4.0 8.7 1.0
O A:CSD112 4.2 8.5 1.0
C A:CSO114 4.3 11.0 1.0
O A:CSO114 4.7 10.3 1.0
CA A:CYS109 4.7 5.8 1.0
NH2 B:ARG141 4.7 7.5 1.0
O A:CYS109 4.8 4.8 1.0
C A:LEU111 4.9 7.5 1.0
O A:THR162 4.9 9.9 1.0

Reference:

M.Nojiri, Y.Kawano, K.Hashimoto, N.Kamiya. Active Center Structures of Photo-Reactive Nitrile Hydratase During Its Photo-Activation Process To Be Published.
Page generated: Thu Jul 17 00:34:05 2025

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