Iron in PDB 2d0s: Crystal Structure of the Cytochrome C552 From Moderate Thermophilic Bacterium, Hydrogenophilus Thermoluteolus

The structure of Crystal Structure of the Cytochrome C552 From Moderate Thermophilic Bacterium, Hydrogenophilus Thermoluteolus, PDB code: 2d0s was solved by S.Nakamura, S.I.Ichiki, H.Takashima, S.Uchiyama, J.Hasegawa, Y.Kobayashi, Y.Sambongi, T.Ohkubo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	9.74 / 2.20
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	49.250, 58.413, 56.315, 90.00, 90.00, 90.00
R / Rfree (%)	18.1 / 21.8

The binding sites of Iron atom in the Crystal Structure of the Cytochrome C552 From Moderate Thermophilic Bacterium, Hydrogenophilus Thermoluteolus (pdb code 2d0s). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of the Cytochrome C552 From Moderate Thermophilic Bacterium, Hydrogenophilus Thermoluteolus, PDB code: 2d0s:

Iron binding site 1 out of 1 in the Crystal Structure of the Cytochrome C552 From Moderate Thermophilic Bacterium, Hydrogenophilus Thermoluteolus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Cytochrome C552 From Moderate Thermophilic Bacterium, Hydrogenophilus Thermoluteolus within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe80 b:11.9 occ:1.00 FE A:HEC80 0.0 11.9 1.0 NA A:HEC80 2.0 12.0 1.0 NB A:HEC80 2.0 11.0 1.0 NC A:HEC80 2.0 11.8 1.0 NE2 A:HIS14 2.0 8.9 1.0 ND A:HEC80 2.2 14.9 1.0 SD A:MET57 2.4 12.5 1.0 C4A A:HEC80 3.0 12.4 1.0 CE1 A:HIS14 3.0 9.2 1.0 C1B A:HEC80 3.0 12.1 1.0 CD2 A:HIS14 3.0 10.3 1.0 C1A A:HEC80 3.0 12.1 1.0 C4B A:HEC80 3.0 10.6 1.0 C1C A:HEC80 3.0 13.1 1.0 C4C A:HEC80 3.1 13.6 1.0 C4D A:HEC80 3.1 14.6 1.0 C1D A:HEC80 3.2 15.4 1.0 CHB A:HEC80 3.4 10.7 1.0 CHC A:HEC80 3.4 11.1 1.0 CHA A:HEC80 3.4 11.9 1.0 CHD A:HEC80 3.5 12.8 1.0 CE A:MET57 3.5 10.4 1.0 CG A:MET57 3.6 10.7 1.0 CB A:MET57 4.1 13.1 1.0 ND1 A:HIS14 4.1 8.1 1.0 CG A:HIS14 4.1 10.8 1.0 C2B A:HEC80 4.2 11.9 1.0 C2A A:HEC80 4.2 10.3 1.0 C3A A:HEC80 4.2 11.6 1.0 C3B A:HEC80 4.2 10.4 1.0 C2C A:HEC80 4.3 12.9 1.0 C3C A:HEC80 4.3 13.0 1.0 C3D A:HEC80 4.4 14.9 1.0 C2D A:HEC80 4.4 16.0 1.0

S.Nakamura, S.I.Ichiki, H.Takashima, S.Uchiyama, J.Hasegawa, Y.Kobayashi, Y.Sambongi, T.Ohkubo. Structure of Cytochrome C552 From A Moderate Thermophilic Bacterium, Hydrogenophilus Thermoluteolus: Comparative Study on the Thermostability of Cytochrome C Biochemistry V. 45 6115 2006.
ISSN: ISSN 0006-2960
PubMed: 16681384
DOI: 10.1021/BI0520131