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Iron in PDB 2gjm: Crystal Structure of Buffalo Lactoperoxidase at 2.75A Resolution

Enzymatic activity of Crystal Structure of Buffalo Lactoperoxidase at 2.75A Resolution

All present enzymatic activity of Crystal Structure of Buffalo Lactoperoxidase at 2.75A Resolution:
1.11.1.7;

Protein crystallography data

The structure of Crystal Structure of Buffalo Lactoperoxidase at 2.75A Resolution, PDB code: 2gjm was solved by I.A.Sheikh, A.S.Ethayathulla, A.K.Singh, N.Singh, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.75
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 54.240, 80.472, 77.348, 90.00, 102.71, 90.00
R / Rfree (%) 18.2 / 21.6

Other elements in 2gjm:

The structure of Crystal Structure of Buffalo Lactoperoxidase at 2.75A Resolution also contains other interesting chemical elements:

Iodine (I) 8 atoms
Calcium (Ca) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Buffalo Lactoperoxidase at 2.75A Resolution (pdb code 2gjm). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Buffalo Lactoperoxidase at 2.75A Resolution, PDB code: 2gjm:

Iron binding site 1 out of 1 in 2gjm

Go back to Iron Binding Sites List in 2gjm
Iron binding site 1 out of 1 in the Crystal Structure of Buffalo Lactoperoxidase at 2.75A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Buffalo Lactoperoxidase at 2.75A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe605

b:23.4
occ:1.00
FE A:HEM605 0.0 23.4 1.0
NA A:HEM605 2.0 19.7 1.0
NB A:HEM605 2.1 18.0 1.0
NE2 A:HIS336 2.2 18.1 1.0
ND A:HEM605 2.2 19.1 1.0
NC A:HEM605 2.2 15.9 1.0
O A:HOH2080 2.7 15.9 1.0
CD2 A:HIS336 2.9 17.1 1.0
C1B A:HEM605 3.0 18.7 1.0
C4A A:HEM605 3.0 19.8 1.0
C1A A:HEM605 3.1 19.7 1.0
C4B A:HEM605 3.1 17.5 1.0
C4D A:HEM605 3.2 19.1 1.0
C1C A:HEM605 3.2 15.4 1.0
C1D A:HEM605 3.2 19.1 1.0
C4C A:HEM605 3.3 16.2 1.0
CHB A:HEM605 3.3 19.5 1.0
CE1 A:HIS336 3.4 18.6 1.0
CHA A:HEM605 3.4 19.6 1.0
CHC A:HEM605 3.5 16.2 1.0
CHD A:HEM605 3.6 17.8 1.0
CG A:HIS336 4.1 17.8 1.0
C2B A:HEM605 4.3 18.1 1.0
C3A A:HEM605 4.3 19.6 1.0
C2A A:HEM605 4.3 19.8 1.0
C3B A:HEM605 4.3 18.0 1.0
ND1 A:HIS336 4.3 17.7 1.0
C3D A:HEM605 4.4 19.0 1.0
C2C A:HEM605 4.4 15.1 1.0
NE2 A:GLN91 4.4 10.8 1.0
C2D A:HEM605 4.5 19.1 1.0
C3C A:HEM605 4.5 15.3 1.0
CD2 A:LEU417 4.8 14.9 1.0

Reference:

I.A.Sheikh, A.S.Ethayathulla, A.K.Singh, N.Singh, S.Sharma, T.P.Singh. Crystal Structure of Buffalo Lactoperoxidase at 2.75A Resolution To Be Published.
Page generated: Sat Aug 3 22:34:18 2024

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