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Iron in PDB 2hyo: Crystal Structure of RV0805 N97A Mutant

Enzymatic activity of Crystal Structure of RV0805 N97A Mutant

All present enzymatic activity of Crystal Structure of RV0805 N97A Mutant:
3.1.4.17;

Protein crystallography data

The structure of Crystal Structure of RV0805 N97A Mutant, PDB code: 2hyo was solved by A.R.Shenoy, M.Capuder, P.Draskovic, D.Lamba, S.S.Visweswariah, M.Podobnik, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 51.16 / 2.25
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 55.215, 93.922, 51.136, 90.00, 90.00, 90.00
R / Rfree (%) 21 / 26.8

Other elements in 2hyo:

The structure of Crystal Structure of RV0805 N97A Mutant also contains other interesting chemical elements:

Manganese (Mn) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of RV0805 N97A Mutant (pdb code 2hyo). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of RV0805 N97A Mutant, PDB code: 2hyo:

Iron binding site 1 out of 1 in 2hyo

Go back to Iron Binding Sites List in 2hyo
Iron binding site 1 out of 1 in the Crystal Structure of RV0805 N97A Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of RV0805 N97A Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe444

b:81.4
occ:0.70
OD2 A:ASP63 2.0 45.2 1.0
NE2 A:HIS23 2.3 47.7 1.0
OD1 A:ASP21 2.4 48.4 1.0
NE2 A:HIS209 2.7 37.0 1.0
CG A:ASP63 3.1 45.2 1.0
CE1 A:HIS23 3.2 47.8 1.0
CG A:ASP21 3.3 47.3 1.0
CD2 A:HIS23 3.4 47.7 1.0
CB A:ASP63 3.5 44.8 1.0
CD2 A:HIS209 3.6 37.9 1.0
CE1 A:HIS209 3.6 37.6 1.0
CB A:ASP21 3.7 46.7 1.0
MN A:MN555 3.7 86.6 0.7
OD1 A:ASP63 4.1 44.3 1.0
O A:HIS207 4.2 36.0 1.0
OD2 A:ASP21 4.3 48.7 1.0
ND1 A:HIS23 4.4 47.8 1.0
CG A:HIS23 4.5 47.5 1.0
CA A:ASP21 4.6 46.7 1.0
CA A:HIS207 4.7 35.9 1.0
CE1 A:HIS169 4.8 39.4 1.0
ND1 A:HIS209 4.8 37.8 1.0
CG A:HIS209 4.8 38.0 1.0
NE2 A:HIS98 4.8 45.5 1.0
CD2 A:HIS98 4.8 44.2 1.0
C A:HIS207 4.9 36.0 1.0
NE2 A:HIS169 4.9 40.2 1.0

Reference:

A.R.Shenoy, M.Capuder, P.Draskovic, D.Lamba, S.S.Visweswariah, M.Podobnik. Structural and Biochemical Analysis of the RV0805 Cyclic Nucleotide Phosphodiesterase From Mycobacterium Tuberculosis. J.Mol.Biol. V. 365 211 2007.
ISSN: ISSN 0022-2836
PubMed: 17059828
DOI: 10.1016/J.JMB.2006.10.005
Page generated: Thu Jul 17 02:11:05 2025

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