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Iron in PDB 2iuj: Crystal Structure of Soybean Lipoxygenase-B

Protein crystallography data

The structure of Crystal Structure of Soybean Lipoxygenase-B, PDB code: 2iuj was solved by B.Youn, G.E.Sellhorn, R.J.Mirchel, B.J.Gaffney, H.D.Grimes, C.Kang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15 / 2.4
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 99.990, 105.310, 105.920, 90.00, 90.00, 90.00
R / Rfree (%) 5 / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Soybean Lipoxygenase-B (pdb code 2iuj). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Soybean Lipoxygenase-B, PDB code: 2iuj:

Iron binding site 1 out of 1 in 2iuj

Go back to Iron Binding Sites List in 2iuj
Iron binding site 1 out of 1 in the Crystal Structure of Soybean Lipoxygenase-B


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Soybean Lipoxygenase-B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1854

b:36.2
occ:1.00
O A:ILE853 2.3 16.6 1.0
NE2 A:HIS518 2.3 15.2 1.0
NE2 A:HIS704 2.4 11.5 1.0
NE2 A:HIS513 2.4 30.0 1.0
CE1 A:HIS513 2.9 32.1 1.0
C A:ILE853 3.0 13.6 1.0
OD1 A:ASN708 3.1 25.0 1.0
CD2 A:HIS518 3.1 8.3 1.0
CE1 A:HIS704 3.2 5.5 1.0
OXT A:ILE853 3.2 19.5 1.0
CE1 A:HIS518 3.3 10.5 1.0
CD2 A:HIS704 3.4 2.0 1.0
CD2 A:HIS513 3.6 22.3 1.0
CG A:ASN708 3.8 17.7 1.0
ND1 A:HIS513 4.2 24.2 1.0
ND1 A:HIS704 4.3 6.5 1.0
CG A:HIS518 4.3 3.0 1.0
CB A:ASN708 4.3 10.9 1.0
CA A:ILE853 4.4 12.5 1.0
ND1 A:HIS518 4.4 11.2 1.0
CG A:HIS704 4.5 2.0 1.0
CG A:HIS513 4.5 12.7 1.0
CG2 A:ILE851 4.5 8.5 1.0
ND2 A:ASN708 4.6 13.5 1.0
CB A:ILE853 4.7 11.2 1.0
N A:ILE853 4.8 13.5 1.0

Reference:

B.Youn, G.E.Sellhorn, R.J.Mirchel, B.J.Gaffney, H.D.Grimes, C.Kang. Crystal Structures of Vegetative Soybean Lipoxygenase Vlx-B and Vlx-D, and Comparisons with Seed Isoforms Lox-1 and Lox-3. Proteins V. 65 1008 2006.
ISSN: ISSN 0887-3585
PubMed: 17022084
DOI: 10.1002/PROT.21182
Page generated: Sat Aug 3 23:26:03 2024

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