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Iron in PDB 2jqr: Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin

Iron Binding Sites:

The binding sites of Iron atom in the Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin (pdb code 2jqr). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 3 binding sites of Iron where determined in the Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin, PDB code: 2jqr:
Jump to Iron binding site number: 1; 2; 3;

Iron binding site 1 out of 3 in 2jqr

Go back to Iron Binding Sites List in 2jqr
Iron binding site 1 out of 3 in the Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe104

b:0.0
occ:1.00
FE A:HEC104 0.0 0.0 1.0
NA A:HEC104 2.0 0.0 1.0
NE2 A:HIS18 2.0 0.0 1.0
NC A:HEC104 2.0 0.0 1.0
ND A:HEC104 2.0 0.0 1.0
NB A:HEC104 2.0 0.0 1.0
SD A:MET80 2.4 0.0 1.0
CE1 A:HIS18 3.0 0.0 1.0
C4B A:HEC104 3.0 0.0 1.0
C4D A:HEC104 3.0 0.0 1.0
C1B A:HEC104 3.0 0.0 1.0
CD2 A:HIS18 3.0 0.0 1.0
C1A A:HEC104 3.0 0.0 1.0
C1C A:HEC104 3.0 0.0 1.0
C1D A:HEC104 3.0 0.0 1.0
C4C A:HEC104 3.1 0.0 1.0
C4A A:HEC104 3.1 0.0 1.0
HE2 A:MET80 3.2 0.0 1.0
HE1 A:HIS18 3.2 0.0 1.0
HD2 A:HIS18 3.3 0.0 1.0
CHD A:HEC104 3.3 0.0 1.0
CE A:MET80 3.3 0.0 1.0
HG3 A:MET80 3.3 0.0 1.0
CHC A:HEC104 3.3 0.0 1.0
CHB A:HEC104 3.4 0.0 1.0
CHA A:HEC104 3.4 0.0 1.0
CG A:MET80 3.5 0.0 1.0
HE1 A:MET80 3.7 0.0 1.0
HB2 A:MET80 3.8 0.0 1.0
ND1 A:HIS18 4.1 0.0 1.0
CG A:HIS18 4.2 0.0 1.0
C2B A:HEC104 4.2 0.0 1.0
C2D A:HEC104 4.2 0.0 1.0
C3D A:HEC104 4.2 0.0 1.0
HE3 A:MET80 4.2 0.0 1.0
CB A:MET80 4.3 0.0 1.0
C3A A:HEC104 4.3 0.0 1.0
C3B A:HEC104 4.3 0.0 1.0
C3C A:HEC104 4.3 0.0 1.0
C2A A:HEC104 4.3 0.0 1.0
C2C A:HEC104 4.3 0.0 1.0
HG2 A:MET80 4.3 0.0 1.0
HHD A:HEC104 4.4 0.0 1.0
HHC A:HEC104 4.4 0.0 1.0
HHA A:HEC104 4.5 0.0 1.0
HHB A:HEC104 4.5 0.0 1.0
HA3 A:GLY29 4.6 0.0 1.0
HE2 A:TYR67 4.6 0.0 1.0
HD2 A:PRO30 4.7 0.0 1.0
HD23 A:LEU32 4.7 0.0 1.0
HB2 A:CYS17 4.7 0.0 1.0
OH A:TYR67 4.9 0.0 1.0
HB3 A:CYS17 4.9 0.0 1.0
HD1 A:HIS18 4.9 0.0 1.0
HB3 A:MET80 5.0 0.0 1.0

Iron binding site 2 out of 3 in 2jqr

Go back to Iron Binding Sites List in 2jqr
Iron binding site 2 out of 3 in the Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe109

b:0.0
occ:1.00
FE1 B:FES109 0.0 0.0 1.0
S1 B:FES109 2.2 0.0 1.0
S2 B:FES109 2.2 0.0 1.0
SG B:CYS52 2.3 0.0 1.0
SG B:CYS46 2.3 0.0 1.0
FE2 B:FES109 2.7 0.0 1.0
H B:CYS46 3.1 0.0 1.0
H B:CYS52 3.3 0.0 1.0
H B:GLY48 3.4 0.0 1.0
H B:ALA51 3.5 0.0 1.0
CB B:CYS52 3.5 0.0 1.0
CB B:CYS46 3.6 0.0 1.0
HB3 B:CYS46 3.6 0.0 1.0
HB3 B:CYS52 3.6 0.0 1.0
HA2 B:GLY48 3.7 0.0 1.0
H B:THR49 3.7 0.0 1.0
N B:CYS52 3.8 0.0 1.0
H B:LEU50 3.8 0.0 1.0
N B:CYS46 3.9 0.0 1.0
CA B:CYS52 4.0 0.0 1.0
O B:CYS52 4.0 0.0 1.0
C B:CYS52 4.0 0.0 1.0
CA B:CYS46 4.1 0.0 1.0
N B:GLY48 4.2 0.0 1.0
HA B:LEU50 4.2 0.0 1.0
N B:ALA51 4.3 0.0 1.0
SG B:CYS55 4.4 0.0 1.0
HA2 B:GLY44 4.4 0.0 1.0
HB3 B:CYS55 4.4 0.0 1.0
CA B:GLY48 4.4 0.0 1.0
HB2 B:CYS52 4.4 0.0 1.0
N B:LEU50 4.4 0.0 1.0
H B:THR54 4.4 0.0 1.0
HB2 B:CYS46 4.5 0.0 1.0
HG1 B:THR54 4.5 0.0 1.0
C B:CYS46 4.5 0.0 1.0
N B:THR49 4.5 0.0 1.0
H B:CYS55 4.5 0.0 1.0
H B:GLU47 4.5 0.0 1.0
SG B:CYS92 4.5 0.0 1.0
N B:GLU47 4.6 0.0 1.0
C B:ALA51 4.7 0.0 1.0
HG1 B:THR49 4.7 0.0 1.0
HB1 B:ALA45 4.8 0.0 1.0
OG1 B:THR54 4.8 0.0 1.0
CA B:LEU50 4.8 0.0 1.0
H B:ALA45 4.8 0.0 1.0
N B:ALA45 4.9 0.0 1.0
C B:GLY48 4.9 0.0 1.0
N B:SER53 4.9 0.0 1.0
HD23 B:LEU50 4.9 0.0 1.0
CB B:CYS55 5.0 0.0 1.0

Iron binding site 3 out of 3 in 2jqr

Go back to Iron Binding Sites List in 2jqr
Iron binding site 3 out of 3 in the Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe109

b:0.0
occ:1.00
FE2 B:FES109 0.0 0.0 1.0
S2 B:FES109 2.2 0.0 1.0
S1 B:FES109 2.2 0.0 1.0
SG B:CYS55 2.3 0.0 1.0
SG B:CYS92 2.3 0.0 1.0
FE1 B:FES109 2.7 0.0 1.0
HB3 B:CYS92 3.0 0.0 1.0
HA2 B:GLY48 3.1 0.0 1.0
HB3 B:CYS55 3.1 0.0 1.0
CB B:CYS92 3.3 0.0 1.0
CB B:CYS55 3.3 0.0 1.0
H B:CYS92 3.4 0.0 1.0
HB3 B:LEU90 3.5 0.0 1.0
HB2 B:CYS55 3.9 0.0 1.0
H B:GLY48 3.9 0.0 1.0
HD23 B:LEU50 4.0 0.0 1.0
HB2 B:CYS92 4.0 0.0 1.0
H B:CYS55 4.1 0.0 1.0
H B:LEU50 4.1 0.0 1.0
CA B:GLY48 4.1 0.0 1.0
N B:CYS92 4.2 0.0 1.0
HD21 B:LEU30 4.3 0.0 1.0
CA B:CYS92 4.3 0.0 1.0
HD12 B:LEU90 4.3 0.0 1.0
SG B:CYS52 4.4 0.0 1.0
HA2 B:GLY44 4.5 0.0 1.0
N B:GLY48 4.5 0.0 1.0
SG B:CYS46 4.5 0.0 1.0
HA B:LEU50 4.5 0.0 1.0
CB B:LEU90 4.6 0.0 1.0
CA B:CYS55 4.6 0.0 1.0
HD23 B:LEU90 4.6 0.0 1.0
N B:CYS55 4.7 0.0 1.0
HA3 B:GLY48 4.7 0.0 1.0
H B:THR49 4.7 0.0 1.0
HD11 B:LEU90 4.8 0.0 1.0
HE21 B:GLN93 4.8 0.0 1.0
HB2 B:LEU90 4.9 0.0 1.0
HG2 B:GLN93 4.9 0.0 1.0
C B:GLY48 4.9 0.0 1.0
O B:CYS52 4.9 0.0 1.0
CD1 B:LEU90 5.0 0.0 1.0
N B:LEU50 5.0 0.0 1.0
HB2 B:LEU30 5.0 0.0 1.0

Reference:

X.Xu, W.Reinle, F.Hannemann, P.V.Konarev, D.I.Svergun, R.Bernhardt, M.Ubbink. Dynamics in A Pure Encounter Complex of Two Proteins Studied By Solution Scattering and Paramagnetic uc(Nmr) Spectroscopy J.Am.Chem.Soc. V. 130 6395 2008.
ISSN: ISSN 0002-7863
PubMed: 18439013
DOI: 10.1021/JA7101357
Page generated: Sat Aug 3 23:52:12 2024

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