Atomistry » Iron » PDB 2j2m-2ksu » 2jqr
Atomistry »
  Iron »
    PDB 2j2m-2ksu »
      2jqr »

Iron in PDB 2jqr: Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin

Iron Binding Sites:

The binding sites of Iron atom in the Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin (pdb code 2jqr). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 3 binding sites of Iron where determined in the Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin, PDB code: 2jqr:
Jump to Iron binding site number: 1; 2; 3;

Iron binding site 1 out of 3 in 2jqr

Go back to Iron Binding Sites List in 2jqr
Iron binding site 1 out of 3 in the Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe104

b:0.0
occ:1.00
FE A:HEC104 0.0 0.0 1.0
NA A:HEC104 2.0 0.0 1.0
NE2 A:HIS18 2.0 0.0 1.0
NC A:HEC104 2.0 0.0 1.0
ND A:HEC104 2.0 0.0 1.0
NB A:HEC104 2.0 0.0 1.0
SD A:MET80 2.4 0.0 1.0
CE1 A:HIS18 3.0 0.0 1.0
C4B A:HEC104 3.0 0.0 1.0
C4D A:HEC104 3.0 0.0 1.0
C1B A:HEC104 3.0 0.0 1.0
CD2 A:HIS18 3.0 0.0 1.0
C1A A:HEC104 3.0 0.0 1.0
C1C A:HEC104 3.0 0.0 1.0
C1D A:HEC104 3.0 0.0 1.0
C4C A:HEC104 3.1 0.0 1.0
C4A A:HEC104 3.1 0.0 1.0
HE2 A:MET80 3.2 0.0 1.0
HE1 A:HIS18 3.2 0.0 1.0
HD2 A:HIS18 3.3 0.0 1.0
CHD A:HEC104 3.3 0.0 1.0
CE A:MET80 3.3 0.0 1.0
HG3 A:MET80 3.3 0.0 1.0
CHC A:HEC104 3.3 0.0 1.0
CHB A:HEC104 3.4 0.0 1.0
CHA A:HEC104 3.4 0.0 1.0
CG A:MET80 3.5 0.0 1.0
HE1 A:MET80 3.7 0.0 1.0
HB2 A:MET80 3.8 0.0 1.0
ND1 A:HIS18 4.1 0.0 1.0
CG A:HIS18 4.2 0.0 1.0
C2B A:HEC104 4.2 0.0 1.0
C2D A:HEC104 4.2 0.0 1.0
C3D A:HEC104 4.2 0.0 1.0
HE3 A:MET80 4.2 0.0 1.0
CB A:MET80 4.3 0.0 1.0
C3A A:HEC104 4.3 0.0 1.0
C3B A:HEC104 4.3 0.0 1.0
C3C A:HEC104 4.3 0.0 1.0
C2A A:HEC104 4.3 0.0 1.0
C2C A:HEC104 4.3 0.0 1.0
HG2 A:MET80 4.3 0.0 1.0
HHD A:HEC104 4.4 0.0 1.0
HHC A:HEC104 4.4 0.0 1.0
HHA A:HEC104 4.5 0.0 1.0
HHB A:HEC104 4.5 0.0 1.0
HA3 A:GLY29 4.6 0.0 1.0
HE2 A:TYR67 4.6 0.0 1.0
HD2 A:PRO30 4.7 0.0 1.0
HD23 A:LEU32 4.7 0.0 1.0
HB2 A:CYS17 4.7 0.0 1.0
OH A:TYR67 4.9 0.0 1.0
HB3 A:CYS17 4.9 0.0 1.0
HD1 A:HIS18 4.9 0.0 1.0
HB3 A:MET80 5.0 0.0 1.0

Iron binding site 2 out of 3 in 2jqr

Go back to Iron Binding Sites List in 2jqr
Iron binding site 2 out of 3 in the Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe109

b:0.0
occ:1.00
FE1 B:FES109 0.0 0.0 1.0
S1 B:FES109 2.2 0.0 1.0
S2 B:FES109 2.2 0.0 1.0
SG B:CYS52 2.3 0.0 1.0
SG B:CYS46 2.3 0.0 1.0
FE2 B:FES109 2.7 0.0 1.0
H B:CYS46 3.1 0.0 1.0
H B:CYS52 3.3 0.0 1.0
H B:GLY48 3.4 0.0 1.0
H B:ALA51 3.5 0.0 1.0
CB B:CYS52 3.5 0.0 1.0
CB B:CYS46 3.6 0.0 1.0
HB3 B:CYS46 3.6 0.0 1.0
HB3 B:CYS52 3.6 0.0 1.0
HA2 B:GLY48 3.7 0.0 1.0
H B:THR49 3.7 0.0 1.0
N B:CYS52 3.8 0.0 1.0
H B:LEU50 3.8 0.0 1.0
N B:CYS46 3.9 0.0 1.0
CA B:CYS52 4.0 0.0 1.0
O B:CYS52 4.0 0.0 1.0
C B:CYS52 4.0 0.0 1.0
CA B:CYS46 4.1 0.0 1.0
N B:GLY48 4.2 0.0 1.0
HA B:LEU50 4.2 0.0 1.0
N B:ALA51 4.3 0.0 1.0
SG B:CYS55 4.4 0.0 1.0
HA2 B:GLY44 4.4 0.0 1.0
HB3 B:CYS55 4.4 0.0 1.0
CA B:GLY48 4.4 0.0 1.0
HB2 B:CYS52 4.4 0.0 1.0
N B:LEU50 4.4 0.0 1.0
H B:THR54 4.4 0.0 1.0
HB2 B:CYS46 4.5 0.0 1.0
HG1 B:THR54 4.5 0.0 1.0
C B:CYS46 4.5 0.0 1.0
N B:THR49 4.5 0.0 1.0
H B:CYS55 4.5 0.0 1.0
H B:GLU47 4.5 0.0 1.0
SG B:CYS92 4.5 0.0 1.0
N B:GLU47 4.6 0.0 1.0
C B:ALA51 4.7 0.0 1.0
HG1 B:THR49 4.7 0.0 1.0
HB1 B:ALA45 4.8 0.0 1.0
OG1 B:THR54 4.8 0.0 1.0
CA B:LEU50 4.8 0.0 1.0
H B:ALA45 4.8 0.0 1.0
N B:ALA45 4.9 0.0 1.0
C B:GLY48 4.9 0.0 1.0
N B:SER53 4.9 0.0 1.0
HD23 B:LEU50 4.9 0.0 1.0
CB B:CYS55 5.0 0.0 1.0

Iron binding site 3 out of 3 in 2jqr

Go back to Iron Binding Sites List in 2jqr
Iron binding site 3 out of 3 in the Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Solution Model of Crosslinked Complex of Cytochrome C and Adrenodoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe109

b:0.0
occ:1.00
FE2 B:FES109 0.0 0.0 1.0
S2 B:FES109 2.2 0.0 1.0
S1 B:FES109 2.2 0.0 1.0
SG B:CYS55 2.3 0.0 1.0
SG B:CYS92 2.3 0.0 1.0
FE1 B:FES109 2.7 0.0 1.0
HB3 B:CYS92 3.0 0.0 1.0
HA2 B:GLY48 3.1 0.0 1.0
HB3 B:CYS55 3.1 0.0 1.0
CB B:CYS92 3.3 0.0 1.0
CB B:CYS55 3.3 0.0 1.0
H B:CYS92 3.4 0.0 1.0
HB3 B:LEU90 3.5 0.0 1.0
HB2 B:CYS55 3.9 0.0 1.0
H B:GLY48 3.9 0.0 1.0
HD23 B:LEU50 4.0 0.0 1.0
HB2 B:CYS92 4.0 0.0 1.0
H B:CYS55 4.1 0.0 1.0
H B:LEU50 4.1 0.0 1.0
CA B:GLY48 4.1 0.0 1.0
N B:CYS92 4.2 0.0 1.0
HD21 B:LEU30 4.3 0.0 1.0
CA B:CYS92 4.3 0.0 1.0
HD12 B:LEU90 4.3 0.0 1.0
SG B:CYS52 4.4 0.0 1.0
HA2 B:GLY44 4.5 0.0 1.0
N B:GLY48 4.5 0.0 1.0
SG B:CYS46 4.5 0.0 1.0
HA B:LEU50 4.5 0.0 1.0
CB B:LEU90 4.6 0.0 1.0
CA B:CYS55 4.6 0.0 1.0
HD23 B:LEU90 4.6 0.0 1.0
N B:CYS55 4.7 0.0 1.0
HA3 B:GLY48 4.7 0.0 1.0
H B:THR49 4.7 0.0 1.0
HD11 B:LEU90 4.8 0.0 1.0
HE21 B:GLN93 4.8 0.0 1.0
HB2 B:LEU90 4.9 0.0 1.0
HG2 B:GLN93 4.9 0.0 1.0
C B:GLY48 4.9 0.0 1.0
O B:CYS52 4.9 0.0 1.0
CD1 B:LEU90 5.0 0.0 1.0
N B:LEU50 5.0 0.0 1.0
HB2 B:LEU30 5.0 0.0 1.0

Reference:

X.Xu, W.Reinle, F.Hannemann, P.V.Konarev, D.I.Svergun, R.Bernhardt, M.Ubbink. Dynamics in A Pure Encounter Complex of Two Proteins Studied By Solution Scattering and Paramagnetic uc(Nmr) Spectroscopy J.Am.Chem.Soc. V. 130 6395 2008.
ISSN: ISSN 0002-7863
PubMed: 18439013
DOI: 10.1021/JA7101357
Page generated: Sat Aug 3 23:52:12 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy