Iron in PDB 2k3v: Solution Structure of A Tetrahaem Cytochrome From Shewanella Frigidimarina

The binding sites of Iron atom in the Solution Structure of A Tetrahaem Cytochrome From Shewanella Frigidimarina (pdb code 2k3v). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Solution Structure of A Tetrahaem Cytochrome From Shewanella Frigidimarina, PDB code: 2k3v:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Solution Structure of A Tetrahaem Cytochrome From Shewanella Frigidimarina


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Solution Structure of A Tetrahaem Cytochrome From Shewanella Frigidimarina within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe218 b:0.0 occ:1.00 FE A:HEC218 0.0 0.0 1.0 NE2 A:HIS65 1.9 0.0 1.0 NC A:HEC218 2.0 0.0 1.0 NE2 A:HIS19 2.0 0.0 1.0 NB A:HEC218 2.0 0.0 1.0 ND A:HEC218 2.1 0.0 1.0 NA A:HEC218 2.1 0.0 1.0 CD2 A:HIS65 2.9 0.0 1.0 CE1 A:HIS65 2.9 0.0 1.0 CD2 A:HIS19 3.0 0.0 1.0 C1C A:HEC218 3.0 0.0 1.0 CE1 A:HIS19 3.0 0.0 1.0 C4B A:HEC218 3.0 0.0 1.0 C4C A:HEC218 3.0 0.0 1.0 C1B A:HEC218 3.1 0.0 1.0 C1D A:HEC218 3.1 0.0 1.0 C4A A:HEC218 3.1 0.0 1.0 C4D A:HEC218 3.1 0.0 1.0 HD2 A:HIS65 3.1 0.0 1.0 C1A A:HEC218 3.1 0.0 1.0 HE1 A:HIS65 3.1 0.0 1.0 HD2 A:HIS19 3.2 0.0 1.0 HE1 A:HIS19 3.2 0.0 1.0 CHC A:HEC218 3.4 0.0 1.0 CHD A:HEC218 3.4 0.0 1.0 CHB A:HEC218 3.5 0.0 1.0 CHA A:HEC218 3.5 0.0 1.0 ND1 A:HIS65 4.0 0.0 1.0 CG A:HIS65 4.0 0.0 1.0 ND1 A:HIS19 4.1 0.0 1.0 CG A:HIS19 4.1 0.0 1.0 C2C A:HEC218 4.2 0.0 1.0 C3C A:HEC218 4.2 0.0 1.0 C3B A:HEC218 4.2 0.0 1.0 C2B A:HEC218 4.3 0.0 1.0 C2D A:HEC218 4.3 0.0 1.0 C3D A:HEC218 4.3 0.0 1.0 C3A A:HEC218 4.4 0.0 1.0 C2A A:HEC218 4.4 0.0 1.0 HB1 A:ALA6 4.4 0.0 1.0 HG3 A:PRO24 4.6 0.0 1.0 HB2 A:CYS18 4.7 0.0 1.0 HB2 A:ALA6 4.8 0.0 1.0 HD1 A:HIS65 4.9 0.0 1.0

Iron binding site 2 out of 4 in the Solution Structure of A Tetrahaem Cytochrome From Shewanella Frigidimarina


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Solution Structure of A Tetrahaem Cytochrome From Shewanella Frigidimarina within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe238 b:0.0 occ:1.00 FE A:HEC238 0.0 0.0 1.0 NC A:HEC238 1.9 0.0 1.0 NE2 A:HIS39 1.9 0.0 1.0 ND A:HEC238 2.0 0.0 1.0 NE2 A:HIS9 2.0 0.0 1.0 NB A:HEC238 2.1 0.0 1.0 NA A:HEC238 2.2 0.0 1.0 CD2 A:HIS39 2.9 0.0 1.0 CE1 A:HIS39 2.9 0.0 1.0 C4C A:HEC238 2.9 0.0 1.0 C1C A:HEC238 3.0 0.0 1.0 CD2 A:HIS9 3.0 0.0 1.0 C1D A:HEC238 3.0 0.0 1.0 CE1 A:HIS9 3.0 0.0 1.0 C4B A:HEC238 3.1 0.0 1.0 C4D A:HEC238 3.1 0.0 1.0 HD2 A:HIS39 3.1 0.0 1.0 C1B A:HEC238 3.2 0.0 1.0 HE1 A:HIS39 3.2 0.0 1.0 C1A A:HEC238 3.2 0.0 1.0 HD2 A:HIS9 3.2 0.0 1.0 C4A A:HEC238 3.2 0.0 1.0 HE1 A:HIS9 3.2 0.0 1.0 CHD A:HEC238 3.3 0.0 1.0 CHC A:HEC238 3.4 0.0 1.0 CHA A:HEC238 3.5 0.0 1.0 CHB A:HEC238 3.6 0.0 1.0 ND1 A:HIS39 4.0 0.0 1.0 CG A:HIS39 4.0 0.0 1.0 ND1 A:HIS9 4.1 0.0 1.0 CG A:HIS9 4.1 0.0 1.0 C3C A:HEC238 4.1 0.0 1.0 C2C A:HEC238 4.2 0.0 1.0 C2D A:HEC238 4.2 0.0 1.0 C3D A:HEC238 4.3 0.0 1.0 C3B A:HEC238 4.3 0.0 1.0 C2B A:HEC238 4.3 0.0 1.0 C2A A:HEC238 4.4 0.0 1.0 C3A A:HEC238 4.4 0.0 1.0 HB2 A:CYS38 4.5 0.0 1.0 HD1 A:HIS39 4.9 0.0 1.0

Iron binding site 3 out of 4 in the Solution Structure of A Tetrahaem Cytochrome From Shewanella Frigidimarina


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Solution Structure of A Tetrahaem Cytochrome From Shewanella Frigidimarina within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe261 b:0.0 occ:1.00 FE A:HEC261 0.0 0.0 1.0 NE2 A:HIS62 1.9 0.0 1.0 NA A:HEC261 1.9 0.0 1.0 NB A:HEC261 2.0 0.0 1.0 NE2 A:HIS49 2.0 0.0 1.0 ND A:HEC261 2.1 0.0 1.0 NC A:HEC261 2.2 0.0 1.0 CD2 A:HIS62 2.9 0.0 1.0 CE1 A:HIS62 2.9 0.0 1.0 C4A A:HEC261 2.9 0.0 1.0 C1B A:HEC261 3.0 0.0 1.0 C1A A:HEC261 3.0 0.0 1.0 CD2 A:HIS49 3.0 0.0 1.0 CE1 A:HIS49 3.0 0.0 1.0 C4B A:HEC261 3.1 0.0 1.0 C4D A:HEC261 3.1 0.0 1.0 HE1 A:HIS62 3.1 0.0 1.0 HD2 A:HIS62 3.1 0.0 1.0 C1D A:HEC261 3.2 0.0 1.0 C1C A:HEC261 3.2 0.0 1.0 HD2 A:HIS49 3.2 0.0 1.0 C4C A:HEC261 3.2 0.0 1.0 HE1 A:HIS49 3.2 0.0 1.0 CHB A:HEC261 3.3 0.0 1.0 CHA A:HEC261 3.4 0.0 1.0 CHC A:HEC261 3.5 0.0 1.0 CHD A:HEC261 3.6 0.0 1.0 ND1 A:HIS62 4.0 0.0 1.0 CG A:HIS62 4.0 0.0 1.0 ND1 A:HIS49 4.1 0.0 1.0 CG A:HIS49 4.1 0.0 1.0 C3A A:HEC261 4.1 0.0 1.0 C2A A:HEC261 4.2 0.0 1.0 C2B A:HEC261 4.2 0.0 1.0 C3B A:HEC261 4.3 0.0 1.0 C3D A:HEC261 4.3 0.0 1.0 C2D A:HEC261 4.4 0.0 1.0 C2C A:HEC261 4.4 0.0 1.0 C3C A:HEC261 4.4 0.0 1.0 HD1 A:HIS62 4.9 0.0 1.0

Iron binding site 4 out of 4 in the Solution Structure of A Tetrahaem Cytochrome From Shewanella Frigidimarina


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Solution Structure of A Tetrahaem Cytochrome From Shewanella Frigidimarina within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe278 b:0.0 occ:1.00 FE A:HEC278 0.0 0.0 1.0 NE2 A:HIS79 1.9 0.0 1.0 NC A:HEC278 1.9 0.0 1.0 ND A:HEC278 2.0 0.0 1.0 NE2 A:HIS52 2.0 0.0 1.0 NB A:HEC278 2.1 0.0 1.0 NA A:HEC278 2.1 0.0 1.0 CD2 A:HIS79 2.9 0.0 1.0 CE1 A:HIS79 2.9 0.0 1.0 C4C A:HEC278 2.9 0.0 1.0 CD2 A:HIS52 3.0 0.0 1.0 C1D A:HEC278 3.0 0.0 1.0 CE1 A:HIS52 3.0 0.0 1.0 C1C A:HEC278 3.0 0.0 1.0 C4D A:HEC278 3.1 0.0 1.0 C4B A:HEC278 3.1 0.0 1.0 HD2 A:HIS79 3.1 0.0 1.0 C1B A:HEC278 3.2 0.0 1.0 C1A A:HEC278 3.2 0.0 1.0 HE1 A:HIS79 3.2 0.0 1.0 C4A A:HEC278 3.2 0.0 1.0 HD2 A:HIS52 3.2 0.0 1.0 HE1 A:HIS52 3.2 0.0 1.0 CHD A:HEC278 3.3 0.0 1.0 CHC A:HEC278 3.4 0.0 1.0 CHA A:HEC278 3.5 0.0 1.0 CHB A:HEC278 3.6 0.0 1.0 ND1 A:HIS79 4.0 0.0 1.0 CG A:HIS79 4.0 0.0 1.0 ND1 A:HIS52 4.1 0.0 1.0 CG A:HIS52 4.1 0.0 1.0 C3C A:HEC278 4.2 0.0 1.0 C2C A:HEC278 4.2 0.0 1.0 C2D A:HEC278 4.2 0.0 1.0 C3D A:HEC278 4.2 0.0 1.0 C3B A:HEC278 4.3 0.0 1.0 C2B A:HEC278 4.4 0.0 1.0 C2A A:HEC278 4.4 0.0 1.0 C3A A:HEC278 4.4 0.0 1.0 CBC A:HEC261 4.6 0.0 1.0 HD23 A:LEU56 4.7 0.0 1.0 HB3 A:CYS78 4.9 0.0 1.0 HD1 A:HIS79 4.9 0.0 1.0

V.B.Paixao, C.A.Salgueiro, L.Brennan, G.A.Reid, S.K.Chapman, D.L.Turner. The Solution Structure of A Tetraheme Cytochrome From Shewanella Frigidimarina Reveals A Novel Family Structural Motif Biochemistry V. 47 11973 2008.
ISSN: ISSN 0006-2960
PubMed: 18950243
DOI: 10.1021/BI801326J