Atomistry » Iron » PDB 2mya-2nwb » 2nwb
Atomistry »
  Iron »
    PDB 2mya-2nwb »
      2nwb »

Iron in PDB 2nwb: Crystal Structure of A Putative 2,3-Dioxygenase (SO4414) From Shewanella Oneidensis in Complex with Ferric Heme. Northeast Structural Genomics Target SOR52.

Protein crystallography data

The structure of Crystal Structure of A Putative 2,3-Dioxygenase (SO4414) From Shewanella Oneidensis in Complex with Ferric Heme. Northeast Structural Genomics Target SOR52., PDB code: 2nwb was solved by F.Forouhar, J.L.R.Anderson, C.G.Mowat, A.Hussain, J.Seetharaman, C.Bruckmann, S.J.Thackray, N.Khan, K.Cunningham, H.Janjua, L.Zhao, R.Xiao, L.C.Ma, J.Liu, M.C.Baran, T.B.Acton, B.Rost, G.T.Montelione, S.K.Champman, L.Tong, Northeast Structural Genomics Consortium (Nesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.99 / 2.40
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 138.851, 68.698, 87.790, 90.00, 90.00, 90.00
R / Rfree (%) 21.7 / 22.5

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of A Putative 2,3-Dioxygenase (SO4414) From Shewanella Oneidensis in Complex with Ferric Heme. Northeast Structural Genomics Target SOR52. (pdb code 2nwb). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of A Putative 2,3-Dioxygenase (SO4414) From Shewanella Oneidensis in Complex with Ferric Heme. Northeast Structural Genomics Target SOR52., PDB code: 2nwb:

Iron binding site 1 out of 1 in 2nwb

Go back to Iron Binding Sites List in 2nwb
Iron binding site 1 out of 1 in the Crystal Structure of A Putative 2,3-Dioxygenase (SO4414) From Shewanella Oneidensis in Complex with Ferric Heme. Northeast Structural Genomics Target SOR52.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of A Putative 2,3-Dioxygenase (SO4414) From Shewanella Oneidensis in Complex with Ferric Heme. Northeast Structural Genomics Target SOR52. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe401

b:34.8
occ:1.00
FE A:HEM401 0.0 34.8 1.0
ND A:HEM401 2.0 36.7 1.0
NA A:HEM401 2.1 36.7 1.0
NB A:HEM401 2.1 36.7 1.0
NC A:HEM401 2.1 36.7 1.0
NE2 A:HIS324 2.5 26.6 1.0
C1D A:HEM401 3.0 39.6 1.0
C4D A:HEM401 3.0 42.8 1.0
C1B A:HEM401 3.0 39.3 1.0
C1A A:HEM401 3.0 41.9 1.0
C4A A:HEM401 3.0 40.1 1.0
C4C A:HEM401 3.1 47.0 1.0
CD2 A:HIS324 3.1 28.0 1.0
C4B A:HEM401 3.2 42.4 1.0
C1C A:HEM401 3.2 50.2 1.0
CHA A:HEM401 3.4 46.5 1.0
CHB A:HEM401 3.4 46.3 1.0
CHD A:HEM401 3.4 43.9 1.0
CHC A:HEM401 3.5 36.6 1.0
O A:HOH402 3.5 11.7 1.0
CE1 A:HIS324 3.6 28.6 1.0
C2D A:HEM401 4.2 38.9 1.0
C3D A:HEM401 4.2 40.1 1.0
C3A A:HEM401 4.3 43.5 1.0
C2A A:HEM401 4.3 43.2 1.0
C2B A:HEM401 4.3 45.1 1.0
CB A:ALA236 4.4 32.1 1.0
C3B A:HEM401 4.4 49.0 1.0
C3C A:HEM401 4.4 48.8 1.0
C2C A:HEM401 4.4 50.6 1.0
CG A:HIS324 4.4 30.4 1.0
ND1 A:HIS324 4.6 30.8 1.0
N A:ALA236 4.9 32.7 1.0

Reference:

F.Forouhar, J.L.Anderson, C.G.Mowat, S.M.Vorobiev, A.Hussain, M.Abashidze, C.Bruckmann, S.J.Thackray, J.Seetharaman, T.Tucker, R.Xiao, L.C.Ma, L.Zhao, T.B.Acton, G.T.Montelione, S.K.Chapman, L.Tong. Molecular Insights Into Substrate Recognition and Catalysis By Tryptophan 2,3-Dioxygenase. Proc.Natl.Acad.Sci.Usa V. 104 473 2007.
ISSN: ISSN 0027-8424
PubMed: 17197414
DOI: 10.1073/PNAS.0610007104
Page generated: Sun Aug 4 00:48:48 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy