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Iron in PDB 2owt: Crystal Structure of Bordetella Pertussis Holo Ferric Binding Protein with Bound Synergistic Carbonate Anion

Protein crystallography data

The structure of Crystal Structure of Bordetella Pertussis Holo Ferric Binding Protein with Bound Synergistic Carbonate Anion, PDB code: 2owt was solved by S.A.L.Tom-Yew, M.E.P.Murphy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.00 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.674, 57.278, 87.927, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 24.2

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Bordetella Pertussis Holo Ferric Binding Protein with Bound Synergistic Carbonate Anion (pdb code 2owt). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Bordetella Pertussis Holo Ferric Binding Protein with Bound Synergistic Carbonate Anion, PDB code: 2owt:

Iron binding site 1 out of 1 in 2owt

Go back to Iron Binding Sites List in 2owt
Iron binding site 1 out of 1 in the Crystal Structure of Bordetella Pertussis Holo Ferric Binding Protein with Bound Synergistic Carbonate Anion


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Bordetella Pertussis Holo Ferric Binding Protein with Bound Synergistic Carbonate Anion within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe324

b:5.4
occ:1.00
OH A:TYR143 1.9 5.2 1.0
OH A:TYR199 1.9 4.5 1.0
O2 A:CO3325 1.9 8.8 1.0
OH A:TYR200 2.0 5.5 1.0
O1 A:CO3325 2.3 8.0 1.0
C A:CO3325 2.5 8.1 1.0
CZ A:TYR200 3.0 6.0 1.0
CZ A:TYR143 3.0 4.6 1.0
CZ A:TYR199 3.0 4.9 1.0
NH2 A:ARG105 3.0 14.1 1.0
CE1 A:TYR199 3.4 5.4 1.0
CE1 A:TYR200 3.5 5.8 1.0
CE1 A:TYR143 3.5 4.2 1.0
O3 A:CO3325 3.8 8.2 1.0
CE2 A:TYR200 3.9 5.0 1.0
O A:HOH328 4.0 2.0 1.0
CE2 A:TYR143 4.0 4.9 1.0
CZ A:ARG105 4.1 11.0 1.0
O A:HOH380 4.2 2.0 1.0
CE2 A:TYR199 4.2 4.0 1.0
O A:HOH335 4.4 2.0 1.0
NH1 A:ARG105 4.5 9.8 1.0
CD1 A:LEU18 4.6 8.9 1.0
ND2 A:ASN197 4.6 4.2 1.0
CG1 A:VAL62 4.7 3.6 1.0
CD1 A:TYR200 4.8 4.8 1.0
CD1 A:TYR199 4.8 5.8 1.0
CD1 A:TYR143 4.9 4.9 1.0
CG2 A:VAL62 4.9 3.4 1.0
CB A:VAL62 4.9 4.3 1.0

Reference:

S.A.L.Tom-Yew, B.H.Shilton, E.G.Bekker, E.I.Tocheva, M.E.P.Murphy. Anion-Dependent Hinge Motion in Ferric Binding Proteins To Be Published.
Page generated: Sun Aug 4 01:08:30 2024

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