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Iron in PDB 2yan: Crystal Structure of the Second Glutaredoxin Domain of Human TXNL2

Protein crystallography data

The structure of Crystal Structure of the Second Glutaredoxin Domain of Human TXNL2, PDB code: 2yan was solved by M.Vollmar, C.Johansson, R.Cocking, J.R.C.Muniz, T.Krojer, C.Allerston, F.Von Delft, C.Bountra, C.H.Arrowsmith, J.Weigelt, A.Edwards, U.Oppermann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.72 / 1.90
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 118.317, 118.317, 58.840, 90.00, 90.00, 120.00
R / Rfree (%) 18.5 / 21.2

Other elements in 2yan:

The structure of Crystal Structure of the Second Glutaredoxin Domain of Human TXNL2 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the Second Glutaredoxin Domain of Human TXNL2 (pdb code 2yan). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of the Second Glutaredoxin Domain of Human TXNL2, PDB code: 2yan:

Iron binding site 1 out of 1 in 2yan

Go back to Iron Binding Sites List in 2yan
Iron binding site 1 out of 1 in the Crystal Structure of the Second Glutaredoxin Domain of Human TXNL2


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Second Glutaredoxin Domain of Human TXNL2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1338

b:61.5
occ:1.00
O A:HOH2023 3.0 29.8 1.0
O A:HOH2022 3.3 28.2 1.0
N A:PHE263 3.9 27.7 1.0
CD2 A:PHE263 4.0 33.3 1.0
NZ A:LYS253 4.2 34.9 1.0
CD A:LYS253 4.3 33.7 1.0
CB A:PHE263 4.4 28.8 1.0
O A:CYS261 4.4 32.7 1.0
NZ A:LYS260 4.4 51.0 1.0
CA A:GLY262 4.5 30.2 1.0
CE A:LYS253 4.6 34.8 1.0
C A:GLY262 4.6 28.6 1.0
CG A:PHE263 4.6 31.8 1.0
CA A:PHE263 4.7 27.1 1.0
N A:SER264 4.8 27.5 1.0
CE2 A:PHE263 4.9 37.6 1.0

Reference:

M.Vollmar, C.Johansson, R.Cocking, J.R.C.Muniz, T.Krojer, C.Allerston, F.Von Delft, C.Bountra, C.H.Arrowsmith, J.Weigelt, A.Edwards, U.Oppermann. Crystal Structure of the Second Glutaredoxin Domain of Human TXNL2 To Be Published.
Page generated: Sun Aug 4 05:10:55 2024

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