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Iron in PDB 3azc: Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1

Enzymatic activity of Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1

All present enzymatic activity of Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1:
1.10.99.1;

Protein crystallography data

The structure of Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1, PDB code: 3azc was solved by S.Veit, K.Takeda, Y.Tsunoyama, M.Roegner, K.Miki, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.61 / 2.00
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 91.324, 91.324, 43.342, 90.00, 90.00, 120.00
R / Rfree (%) 19.7 / 23.6

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1 (pdb code 3azc). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1, PDB code: 3azc:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3azc

Go back to Iron Binding Sites List in 3azc
Iron binding site 1 out of 2 in the Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:49.0
occ:1.00
FE1 A:FES201 0.0 49.0 1.0
S2 A:FES201 2.3 47.3 1.0
S1 A:FES201 2.3 46.8 1.0
SG A:CYS126 2.3 47.5 1.0
SG A:CYS108 2.3 45.8 1.0
FE2 A:FES201 2.7 50.4 1.0
CB A:CYS126 3.1 39.4 1.0
CB A:CYS108 3.2 45.1 1.0
CB A:HIS110 4.1 61.4 1.0
ND1 A:HIS110 4.3 64.2 1.0
CB A:CYS128 4.3 48.9 1.0
OG A:SER131 4.3 44.3 1.0
CB A:CYS113 4.3 47.6 1.0
CB A:SER131 4.4 46.8 1.0
N A:HIS129 4.5 56.1 1.0
ND1 A:HIS129 4.5 65.5 1.0
CA A:CYS126 4.6 41.2 1.0
CG A:HIS110 4.6 60.9 1.0
CA A:CYS108 4.6 37.2 1.0
N A:LEU111 4.7 51.5 1.0
N A:CYS113 4.9 52.1 1.0
N A:SER131 5.0 50.1 1.0
C A:CYS126 5.0 48.1 1.0

Iron binding site 2 out of 2 in 3azc

Go back to Iron Binding Sites List in 3azc
Iron binding site 2 out of 2 in the Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:50.4
occ:1.00
FE2 A:FES201 0.0 50.4 1.0
ND1 A:HIS110 2.1 64.2 1.0
ND1 A:HIS129 2.1 65.5 1.0
S1 A:FES201 2.2 46.8 1.0
S2 A:FES201 2.2 47.3 1.0
FE1 A:FES201 2.7 49.0 1.0
CE1 A:HIS110 3.0 62.9 1.0
CG A:HIS129 3.0 52.9 1.0
CG A:HIS110 3.1 60.9 1.0
CE1 A:HIS129 3.1 54.1 1.0
CB A:HIS129 3.3 50.9 1.0
CB A:HIS110 3.5 61.4 1.0
N A:HIS129 3.7 56.1 1.0
CB A:CYS128 4.0 48.9 1.0
CA A:HIS129 4.1 46.4 1.0
N A:LEU111 4.1 51.5 1.0
NE2 A:HIS110 4.1 69.2 1.0
CD2 A:HIS129 4.2 54.0 1.0
CD2 A:HIS110 4.2 64.1 1.0
NE2 A:HIS129 4.2 55.5 1.0
CB A:LEU111 4.2 67.2 1.0
C A:CYS128 4.4 60.5 1.0
SG A:CYS108 4.4 45.8 1.0
SG A:CYS126 4.4 47.5 1.0
CG A:PRO143 4.7 37.5 1.0
CA A:LEU111 4.7 50.0 1.0
CA A:HIS110 4.8 49.5 1.0
C A:HIS110 4.8 53.1 1.0
CA A:CYS128 4.8 55.0 1.0
OG A:SER131 4.8 44.3 1.0
C A:HIS129 4.8 47.5 1.0
CD2 A:LEU111 4.9 72.2 1.0

Reference:

S.Veit, K.Takeda, Y.Tsunoyama, D.Rexroth, M.Rogner, K.Miki. Structure of A Thermophilic Cyanobacterial B(6)F-Type Rieske Protein Acta Crystallogr.,Sect.D V. 68 1400 2012.
ISSN: ISSN 0907-4449
PubMed: 22993094
DOI: 10.1107/S0907444912034129
Page generated: Mon Aug 4 23:37:38 2025

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