Iron in PDB 3fc5: G586S Mutant Nnosoxy
Enzymatic activity of G586S Mutant Nnosoxy
All present enzymatic activity of G586S Mutant Nnosoxy:
1.14.13.39;
Protein crystallography data
The structure of G586S Mutant Nnosoxy, PDB code: 3fc5
was solved by
C.Bruckmann,
C.G.Mowat,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
34.27 /
2.59
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
51.623,
110.276,
164.671,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
19.9 /
25.4
|
Other elements in 3fc5:
The structure of G586S Mutant Nnosoxy also contains other interesting chemical elements:
Iron Binding Sites:
The binding sites of Iron atom in the G586S Mutant Nnosoxy
(pdb code 3fc5). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
G586S Mutant Nnosoxy, PDB code: 3fc5:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 3fc5
Go back to
Iron Binding Sites List in 3fc5
Iron binding site 1 out
of 2 in the G586S Mutant Nnosoxy
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of G586S Mutant Nnosoxy within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe750
b:37.0
occ:1.00
|
FE
|
A:HEM750
|
0.0
|
37.0
|
1.0
|
NC
|
A:HEM750
|
2.1
|
48.9
|
1.0
|
NB
|
A:HEM750
|
2.1
|
38.0
|
1.0
|
ND
|
A:HEM750
|
2.1
|
31.2
|
1.0
|
NA
|
A:HEM750
|
2.1
|
40.1
|
1.0
|
SG
|
A:CYS415
|
2.4
|
40.8
|
1.0
|
C4C
|
A:HEM750
|
3.0
|
37.2
|
1.0
|
C1B
|
A:HEM750
|
3.1
|
36.1
|
1.0
|
C1D
|
A:HEM750
|
3.1
|
37.7
|
1.0
|
C4A
|
A:HEM750
|
3.1
|
34.4
|
1.0
|
C4B
|
A:HEM750
|
3.1
|
44.6
|
1.0
|
C1C
|
A:HEM750
|
3.1
|
39.3
|
1.0
|
C4D
|
A:HEM750
|
3.1
|
33.5
|
1.0
|
C1A
|
A:HEM750
|
3.2
|
34.2
|
1.0
|
CHD
|
A:HEM750
|
3.3
|
40.6
|
1.0
|
CHB
|
A:HEM750
|
3.4
|
31.2
|
1.0
|
CB
|
A:CYS415
|
3.4
|
41.3
|
1.0
|
CHC
|
A:HEM750
|
3.5
|
39.5
|
1.0
|
CHA
|
A:HEM750
|
3.5
|
34.3
|
1.0
|
CA
|
A:CYS415
|
4.1
|
37.6
|
1.0
|
C3C
|
A:HEM750
|
4.3
|
38.2
|
1.0
|
C2B
|
A:HEM750
|
4.3
|
46.2
|
1.0
|
C2C
|
A:HEM750
|
4.3
|
41.9
|
1.0
|
C3B
|
A:HEM750
|
4.3
|
43.9
|
1.0
|
C2D
|
A:HEM750
|
4.3
|
28.9
|
1.0
|
C3A
|
A:HEM750
|
4.3
|
41.0
|
1.0
|
C3D
|
A:HEM750
|
4.4
|
37.8
|
1.0
|
C2A
|
A:HEM750
|
4.4
|
37.0
|
1.0
|
NH1
|
A:ARG770
|
4.4
|
30.6
|
1.0
|
NE1
|
A:TRP409
|
4.4
|
36.2
|
1.0
|
N
|
A:GLY417
|
4.6
|
47.6
|
1.0
|
CZ
|
A:ARG770
|
4.7
|
37.3
|
1.0
|
C
|
A:CYS415
|
4.8
|
36.7
|
1.0
|
CA
|
A:GLY417
|
4.9
|
41.3
|
1.0
|
N
|
A:VAL416
|
4.9
|
39.4
|
1.0
|
NH2
|
A:ARG770
|
5.0
|
35.4
|
1.0
|
|
Iron binding site 2 out
of 2 in 3fc5
Go back to
Iron Binding Sites List in 3fc5
Iron binding site 2 out
of 2 in the G586S Mutant Nnosoxy
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of G586S Mutant Nnosoxy within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe750
b:37.7
occ:1.00
|
FE
|
B:HEM750
|
0.0
|
37.7
|
1.0
|
NA
|
B:HEM750
|
2.0
|
39.9
|
1.0
|
NB
|
B:HEM750
|
2.0
|
43.9
|
1.0
|
NC
|
B:HEM750
|
2.1
|
46.7
|
1.0
|
ND
|
B:HEM750
|
2.1
|
33.5
|
1.0
|
SG
|
B:CYS415
|
2.5
|
37.5
|
1.0
|
C1B
|
B:HEM750
|
3.0
|
47.9
|
1.0
|
C4A
|
B:HEM750
|
3.0
|
34.8
|
1.0
|
C4C
|
B:HEM750
|
3.1
|
38.8
|
1.0
|
C1A
|
B:HEM750
|
3.1
|
43.0
|
1.0
|
C4B
|
B:HEM750
|
3.1
|
41.1
|
1.0
|
C1D
|
B:HEM750
|
3.1
|
42.5
|
1.0
|
C1C
|
B:HEM750
|
3.1
|
46.8
|
1.0
|
C4D
|
B:HEM750
|
3.1
|
33.7
|
1.0
|
CHB
|
B:HEM750
|
3.4
|
36.5
|
1.0
|
CHD
|
B:HEM750
|
3.4
|
38.2
|
1.0
|
CHA
|
B:HEM750
|
3.5
|
36.5
|
1.0
|
CHC
|
B:HEM750
|
3.5
|
49.2
|
1.0
|
CB
|
B:CYS415
|
3.5
|
39.6
|
1.0
|
CA
|
B:CYS415
|
4.2
|
37.3
|
1.0
|
NH1
|
B:ARG771
|
4.2
|
38.4
|
1.0
|
C2B
|
B:HEM750
|
4.2
|
45.3
|
1.0
|
C3A
|
B:HEM750
|
4.2
|
41.3
|
1.0
|
C2A
|
B:HEM750
|
4.3
|
41.1
|
1.0
|
C3C
|
B:HEM750
|
4.3
|
45.5
|
1.0
|
C3B
|
B:HEM750
|
4.3
|
39.9
|
1.0
|
C2C
|
B:HEM750
|
4.3
|
42.0
|
1.0
|
C2D
|
B:HEM750
|
4.3
|
39.4
|
1.0
|
C3D
|
B:HEM750
|
4.4
|
43.6
|
1.0
|
NE1
|
B:TRP409
|
4.5
|
34.9
|
1.0
|
CZ
|
B:ARG771
|
4.5
|
34.9
|
1.0
|
NH2
|
B:ARG771
|
4.7
|
38.1
|
1.0
|
N
|
B:GLY417
|
4.7
|
47.3
|
1.0
|
C
|
B:CYS415
|
4.9
|
37.1
|
1.0
|
CA
|
B:GLY417
|
5.0
|
42.5
|
1.0
|
N
|
B:VAL416
|
5.0
|
38.2
|
1.0
|
|
Reference:
D.Papale,
C.Bruckmann,
C.S.Miles,
C.G.Mowat,
S.Daff.
Oxygen Activation in Neuronal No Synthase: Stabilisation of A Novel Intermediate in the G586S Mutant To Be Published.
Page generated: Sun Aug 4 10:01:28 2024
|