Atomistry » Iron » PDB 3pcq-3puq » 3pq6
Atomistry »
  Iron »
    PDB 3pcq-3puq »
      3pq6 »

Iron in PDB 3pq6: Structure of I274C Variant of E. Coli Kate[] - Images 25-30

Enzymatic activity of Structure of I274C Variant of E. Coli Kate[] - Images 25-30

All present enzymatic activity of Structure of I274C Variant of E. Coli Kate[] - Images 25-30:
1.11.1.6;

Protein crystallography data

The structure of Structure of I274C Variant of E. Coli Kate[] - Images 25-30, PDB code: 3pq6 was solved by P.C.Loewen, V.Jha, S.Louis, P.Chelikani, X.Carpena, I.Fita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.25 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 93.501, 133.023, 122.673, 90.00, 109.40, 90.00
R / Rfree (%) 14.3 / 19.1

Iron Binding Sites:

The binding sites of Iron atom in the Structure of I274C Variant of E. Coli Kate[] - Images 25-30 (pdb code 3pq6). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the Structure of I274C Variant of E. Coli Kate[] - Images 25-30, PDB code: 3pq6:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Iron binding site 1 out of 8 in 3pq6

Go back to Iron Binding Sites List in 3pq6
Iron binding site 1 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 25-30


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of I274C Variant of E. Coli Kate[] - Images 25-30 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe760

b:3.0
occ:0.50
 FE A:HDD760 0.0 3.0 0.5
FE A:HDE761 0.5 11.2 0.5
NC A:HDE761 1.7 8.9 0.5
OH A:TYR415 1.8 9.3 1.0
NC A:HDD760 2.0 5.1 0.5
NA A:HDD760 2.0 3.0 0.5
NB A:HDD760 2.0 5.4 0.5
NB A:HDE761 2.1 8.6 0.5
ND A:HDE761 2.1 4.8 0.5
ND A:HDD760 2.2 2.9 0.5
O A:HOH3592 2.4 15.2 1.0
NA A:HDE761 2.4 8.8 0.5
C4C A:HDE761 2.7 10.2 0.5
C1C A:HDE761 2.7 10.1 0.5
C4B A:HDE761 2.9 8.4 0.5
CZ A:TYR415 2.9 5.2 1.0
C4C A:HDD760 3.0 4.3 0.5
C1A A:HDD760 3.0 3.7 0.5
C1C A:HDD760 3.0 5.9 0.5
C1D A:HDE761 3.0 6.0 0.5
C4A A:HDD760 3.0 3.0 0.5
C4B A:HDD760 3.1 4.8 0.5
C1B A:HDD760 3.1 4.8 0.5
C1D A:HDD760 3.2 3.7 0.5
C1B A:HDE761 3.2 9.4 0.5
C4D A:HDD760 3.2 2.9 0.5
CHC A:HDE761 3.2 7.0 0.5
C4D A:HDE761 3.2 7.1 0.5
CHD A:HDE761 3.3 7.2 0.5
C1A A:HDE761 3.4 8.0 0.5
C4A A:HDE761 3.4 9.9 0.5
CHC A:HDD760 3.4 4.8 0.5
CHD A:HDD760 3.4 4.1 0.5
CHA A:HDD760 3.5 3.2 0.5
CHB A:HDD760 3.5 3.1 0.5
CE1 A:TYR415 3.6 4.1 1.0
CHA A:HDE761 3.7 7.9 0.5
CHB A:HDE761 3.7 10.7 0.5
CE2 A:TYR415 3.8 5.4 1.0
NE A:ARG411 3.9 5.0 1.0
C3C A:HDE761 3.9 9.5 0.5
C2C A:HDE761 3.9 11.8 0.5
NH2 A:ARG411 4.1 6.5 1.0
O A:HOH1082 4.1 22.9 1.0
C3B A:HDE761 4.1 7.5 0.5
C3A A:HDD760 4.2 3.1 0.5
C3C A:HDD760 4.2 3.0 0.5
C2C A:HDD760 4.2 5.6 0.5
C2A A:HDD760 4.2 3.0 0.5
C2B A:HDE761 4.3 8.2 0.5
C3B A:HDD760 4.3 7.7 0.5
C2B A:HDD760 4.3 6.2 0.5
C2D A:HDE761 4.3 5.6 0.5
C2D A:HDD760 4.4 5.2 0.5
CZ A:ARG411 4.4 8.6 1.0
C3D A:HDD760 4.5 3.1 0.5
C3D A:HDE761 4.5 4.8 0.5
NE2 A:HIS128 4.6 7.4 1.0
CZ A:PHE214 4.7 4.5 1.0
C3A A:HDE761 4.7 11.0 0.5
C2A A:HDE761 4.8 8.9 0.5
CG2 A:VAL127 4.8 4.3 1.0
CD2 A:HIS128 4.8 3.9 1.0
CD1 A:TYR415 4.9 7.5 1.0
CD A:ARG411 5.0 7.2 1.0

Iron binding site 2 out of 8 in 3pq6

Go back to Iron Binding Sites List in 3pq6
Iron binding site 2 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 25-30


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of I274C Variant of E. Coli Kate[] - Images 25-30 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe761

b:11.2
occ:0.50
 FE A:HDE761 0.0 11.2 0.5
FE A:HDD760 0.5 3.0 0.5
ND A:HDD760 1.8 2.9 0.5
NB A:HDE761 2.0 8.6 0.5
NA A:HDE761 2.0 8.8 0.5
NA A:HDD760 2.0 3.0 0.5
NC A:HDE761 2.0 8.9 0.5
NC A:HDD760 2.1 5.1 0.5
ND A:HDE761 2.1 4.8 0.5
O A:HOH3592 2.1 15.2 1.0
OH A:TYR415 2.2 9.3 1.0
NB A:HDD760 2.5 5.4 0.5
C1D A:HDD760 2.8 3.7 0.5
C4D A:HDD760 2.8 2.9 0.5
C1A A:HDD760 2.9 3.7 0.5
C4C A:HDD760 2.9 4.3 0.5
C4B A:HDE761 3.0 8.4 0.5
C1A A:HDE761 3.0 8.0 0.5
C1B A:HDE761 3.0 9.4 0.5
C4D A:HDE761 3.0 7.1 0.5
CZ A:TYR415 3.1 5.2 1.0
C4A A:HDE761 3.1 9.9 0.5
C4C A:HDE761 3.1 10.2 0.5
C1C A:HDE761 3.1 10.1 0.5
CHA A:HDD760 3.1 3.2 0.5
C1D A:HDE761 3.2 6.0 0.5
C4A A:HDD760 3.2 3.0 0.5
CHD A:HDD760 3.2 4.1 0.5
C1C A:HDD760 3.2 5.9 0.5
CHA A:HDE761 3.4 7.9 0.5
CHC A:HDE761 3.4 7.0 0.5
C4B A:HDD760 3.4 4.8 0.5
CHB A:HDE761 3.5 10.7 0.5
C1B A:HDD760 3.5 4.8 0.5
CHD A:HDE761 3.6 7.2 0.5
CE1 A:TYR415 3.7 4.1 1.0
CHC A:HDD760 3.7 4.8 0.5
CHB A:HDD760 3.8 3.1 0.5
CE2 A:TYR415 4.0 5.4 1.0
C2D A:HDD760 4.0 5.2 0.5
C3D A:HDD760 4.1 3.1 0.5
O A:HOH1082 4.1 22.9 1.0
C2A A:HDD760 4.2 3.0 0.5
C3B A:HDE761 4.2 7.5 0.5
C3C A:HDD760 4.2 3.0 0.5
C2B A:HDE761 4.2 8.2 0.5
CG2 A:VAL127 4.3 4.3 1.0
C3A A:HDD760 4.3 3.1 0.5
C2C A:HDD760 4.3 5.6 0.5
C3C A:HDE761 4.3 9.5 0.5
C2C A:HDE761 4.3 11.8 0.5
NE A:ARG411 4.3 5.0 1.0
C3A A:HDE761 4.4 11.0 0.5
C3D A:HDE761 4.4 4.8 0.5
C2D A:HDE761 4.4 5.6 0.5
C2A A:HDE761 4.4 8.9 0.5
CZ A:PHE214 4.5 4.5 1.0
NE2 A:HIS128 4.5 7.4 1.0
NH2 A:ARG411 4.6 6.5 1.0
CD2 A:HIS128 4.6 3.9 1.0
C3B A:HDD760 4.7 7.7 0.5
C2B A:HDD760 4.7 6.2 0.5
O1D A:HDD760 4.8 8.4 0.5
OND A:HDD760 4.9 7.8 0.5
CZ A:ARG411 4.9 8.6 1.0
CD1 A:TYR415 4.9 7.5 1.0

Iron binding site 3 out of 8 in 3pq6

Go back to Iron Binding Sites List in 3pq6
Iron binding site 3 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 25-30


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structure of I274C Variant of E. Coli Kate[] - Images 25-30 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe760

b:3.1
occ:0.50
 FE B:HDD760 0.0 3.1 0.5
FE B:HDE761 0.5 14.9 0.5
OH B:TYR415 1.8 3.8 1.0
NA B:HDE761 1.8 11.2 0.5
NA B:HDD760 2.0 4.8 0.5
NC B:HDD760 2.0 6.6 0.5
NB B:HDD760 2.1 7.5 0.5
NB B:HDE761 2.1 13.3 0.5
ND B:HDE761 2.1 11.0 0.5
ND B:HDD760 2.1 4.5 0.5
NC B:HDE761 2.3 14.3 0.5
O B:HOH3593 2.6 17.4 1.0
CZ B:TYR415 2.7 4.6 1.0
C4A B:HDE761 2.8 12.0 0.5
C1A B:HDE761 2.8 11.7 0.5
C1B B:HDE761 2.9 8.5 0.5
C4A B:HDD760 3.0 4.0 0.5
C4C B:HDD760 3.0 3.0 0.5
C1C B:HDD760 3.0 5.0 0.5
C4D B:HDE761 3.1 9.6 0.5
C1B B:HDD760 3.1 5.1 0.5
C1A B:HDD760 3.1 3.2 0.5
C4B B:HDD760 3.1 5.0 0.5
C1D B:HDD760 3.1 3.0 0.5
C4B B:HDE761 3.2 10.9 0.5
C4D B:HDD760 3.2 3.4 0.5
C1D B:HDE761 3.2 10.7 0.5
CHB B:HDE761 3.2 11.8 0.5
C4C B:HDE761 3.3 10.3 0.5
C1C B:HDE761 3.3 12.7 0.5
CHA B:HDE761 3.3 11.3 0.5
CHB B:HDD760 3.4 3.2 0.5
CHD B:HDD760 3.4 4.7 0.5
CE1 B:TYR415 3.4 5.7 1.0
CHC B:HDD760 3.5 4.1 0.5
CHA B:HDD760 3.6 4.8 0.5
CHD B:HDE761 3.7 7.6 0.5
CHC B:HDE761 3.7 14.6 0.5
CE2 B:TYR415 3.7 8.2 1.0
C3A B:HDE761 4.1 11.6 0.5
C2A B:HDE761 4.1 11.2 0.5
NE B:ARG411 4.1 5.6 1.0
C2B B:HDE761 4.1 8.5 0.5
C3A B:HDD760 4.2 3.8 0.5
C3C B:HDD760 4.3 3.8 0.5
C2C B:HDD760 4.3 6.8 0.5
NH2 B:ARG411 4.3 6.6 1.0
C3B B:HDE761 4.3 12.6 0.5
C2A B:HDD760 4.3 3.1 0.5
C2B B:HDD760 4.3 5.9 0.5
C3B B:HDD760 4.3 7.1 0.5
C2D B:HDD760 4.4 3.9 0.5
C3D B:HDE761 4.4 8.2 0.5
C2D B:HDE761 4.4 9.4 0.5
C3D B:HDD760 4.4 4.0 0.5
C3C B:HDE761 4.4 11.2 0.5
C2C B:HDE761 4.5 12.0 0.5
CZ B:ARG411 4.6 8.4 1.0
O B:HOH840 4.6 31.4 1.0
NE2 B:HIS128 4.7 7.0 1.0
CD1 B:TYR415 4.7 6.5 1.0
CG2 B:VAL127 4.8 6.2 1.0
CZ B:PHE214 4.8 6.4 1.0
CD2 B:HIS128 4.8 3.2 1.0
O1A B:HDE761 4.8 15.5 0.5
CD2 B:TYR415 4.9 3.9 1.0
ONA B:HDE761 4.9 9.1 0.5

Iron binding site 4 out of 8 in 3pq6

Go back to Iron Binding Sites List in 3pq6
Iron binding site 4 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 25-30


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Structure of I274C Variant of E. Coli Kate[] - Images 25-30 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe761

b:14.9
occ:0.50
 FE B:HDE761 0.0 14.9 0.5
FE B:HDD760 0.5 3.1 0.5
NB B:HDD760 1.9 7.5 0.5
NA B:HDE761 2.0 11.2 0.5
NB B:HDE761 2.0 13.3 0.5
NC B:HDE761 2.0 14.3 0.5
NA B:HDD760 2.0 4.8 0.5
O B:HOH3593 2.1 17.4 1.0
ND B:HDE761 2.1 11.0 0.5
NC B:HDD760 2.1 6.6 0.5
OH B:TYR415 2.2 3.8 1.0
ND B:HDD760 2.4 4.5 0.5
C1B B:HDD760 2.9 5.1 0.5
C4B B:HDD760 2.9 5.0 0.5
C4A B:HDD760 2.9 4.0 0.5
C1C B:HDD760 3.0 5.0 0.5
C1B B:HDE761 3.0 8.5 0.5
C4B B:HDE761 3.0 10.9 0.5
C4A B:HDE761 3.0 12.0 0.5
C1A B:HDE761 3.1 11.7 0.5
C4C B:HDE761 3.1 10.3 0.5
C1C B:HDE761 3.1 12.7 0.5
C4D B:HDE761 3.1 9.6 0.5
C1D B:HDE761 3.1 10.7 0.5
C4C B:HDD760 3.2 3.0 0.5
C1A B:HDD760 3.2 3.2 0.5
CZ B:TYR415 3.2 4.6 1.0
CHB B:HDD760 3.3 3.2 0.5
CHC B:HDD760 3.3 4.1 0.5
C1D B:HDD760 3.4 3.0 0.5
C4D B:HDD760 3.4 3.4 0.5
CHB B:HDE761 3.4 11.8 0.5
CHC B:HDE761 3.4 14.6 0.5
CHA B:HDE761 3.4 11.3 0.5
CHD B:HDE761 3.5 7.6 0.5
CHD B:HDD760 3.6 4.7 0.5
CHA B:HDD760 3.7 4.8 0.5
CE1 B:TYR415 3.9 5.7 1.0
C2B B:HDD760 4.1 5.9 0.5
C3B B:HDD760 4.1 7.1 0.5
O B:HOH840 4.2 31.4 1.0
CE2 B:TYR415 4.2 8.2 1.0
C3A B:HDD760 4.2 3.8 0.5
C2B B:HDE761 4.2 8.5 0.5
C2C B:HDD760 4.2 6.8 0.5
C3B B:HDE761 4.2 12.6 0.5
C3C B:HDE761 4.3 11.2 0.5
C2A B:HDD760 4.3 3.1 0.5
C3C B:HDD760 4.3 3.8 0.5
NE B:ARG411 4.3 5.6 1.0
NE2 B:HIS128 4.3 7.0 1.0
C2C B:HDE761 4.3 12.0 0.5
C2A B:HDE761 4.4 11.2 0.5
C3A B:HDE761 4.4 11.6 0.5
C2D B:HDE761 4.4 9.4 0.5
C3D B:HDE761 4.4 8.2 0.5
NH2 B:ARG411 4.5 6.6 1.0
CZ B:PHE214 4.5 6.4 1.0
CD2 B:HIS128 4.5 3.2 1.0
CG2 B:VAL127 4.6 6.2 1.0
C2D B:HDD760 4.6 3.9 0.5
C3D B:HDD760 4.7 4.0 0.5
CZ B:ARG411 4.8 8.4 1.0

Iron binding site 5 out of 8 in 3pq6

Go back to Iron Binding Sites List in 3pq6
Iron binding site 5 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 25-30


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Structure of I274C Variant of E. Coli Kate[] - Images 25-30 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe760

b:4.0
occ:0.50
 FE C:HDD760 0.0 4.0 0.5
FE C:HDE761 0.3 12.8 0.5
OH C:TYR415 1.9 7.3 1.0
NA C:HDE761 1.9 11.3 0.5
NA C:HDD760 2.0 3.1 0.5
NB C:HDE761 2.0 11.4 0.5
NC C:HDD760 2.0 4.6 0.5
NB C:HDD760 2.1 8.0 0.5
NC C:HDE761 2.1 12.0 0.5
ND C:HDE761 2.2 10.6 0.5
ND C:HDD760 2.2 4.7 0.5
O C:HOH3277 2.5 16.3 1.0
CZ C:TYR415 2.9 6.4 1.0
C1B C:HDE761 2.9 10.7 0.5
C4A C:HDE761 2.9 12.8 0.5
C4A C:HDD760 3.0 3.7 0.5
C1A C:HDE761 3.0 10.9 0.5
C4C C:HDD760 3.0 4.8 0.5
C4B C:HDE761 3.0 11.8 0.5
C1A C:HDD760 3.0 3.1 0.5
C1C C:HDD760 3.1 7.4 0.5
C1B C:HDD760 3.1 7.8 0.5
C4C C:HDE761 3.1 10.7 0.5
C1C C:HDE761 3.1 10.0 0.5
C4B C:HDD760 3.1 6.3 0.5
C4D C:HDE761 3.2 9.5 0.5
C4D C:HDD760 3.2 3.5 0.5
C1D C:HDD760 3.2 5.0 0.5
C1D C:HDE761 3.2 10.8 0.5
CHB C:HDE761 3.4 11.6 0.5
CHB C:HDD760 3.4 6.8 0.5
CHD C:HDD760 3.4 5.8 0.5
CHC C:HDE761 3.5 9.8 0.5
CHA C:HDE761 3.5 9.8 0.5
CHA C:HDD760 3.5 3.0 0.5
CHC C:HDD760 3.5 5.7 0.5
CHD C:HDE761 3.6 10.6 0.5
CE1 C:TYR415 3.6 6.3 1.0
CE2 C:TYR415 3.8 7.9 1.0
NE C:ARG411 4.0 3.2 1.0
NH2 C:ARG411 4.1 4.6 1.0
C2B C:HDE761 4.1 11.8 0.5
C3B C:HDE761 4.2 9.5 0.5
C3A C:HDD760 4.2 5.7 0.5
C3C C:HDD760 4.2 6.7 0.5
C3A C:HDE761 4.2 12.3 0.5
C2A C:HDD760 4.3 3.1 0.5
C3C C:HDE761 4.3 8.4 0.5
C2C C:HDD760 4.3 5.7 0.5
C2A C:HDE761 4.3 12.2 0.5
C2B C:HDD760 4.3 8.4 0.5
C3B C:HDD760 4.3 9.9 0.5
C2C C:HDE761 4.3 10.4 0.5
O C:HOH1263 4.3 27.2 1.0
C2D C:HDD760 4.5 4.7 0.5
C2D C:HDE761 4.5 10.8 0.5
C3D C:HDD760 4.5 4.8 0.5
C3D C:HDE761 4.5 8.2 0.5
CZ C:ARG411 4.5 9.9 1.0
NE2 C:HIS128 4.6 7.2 1.0
CZ C:PHE214 4.7 7.0 1.0
CG2 C:VAL127 4.8 4.5 1.0
CD2 C:HIS128 4.8 3.9 1.0
CD1 C:TYR415 4.9 5.9 1.0
O1A C:HDE761 5.0 14.6 0.5

Iron binding site 6 out of 8 in 3pq6

Go back to Iron Binding Sites List in 3pq6
Iron binding site 6 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 25-30


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Structure of I274C Variant of E. Coli Kate[] - Images 25-30 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe761

b:12.8
occ:0.50
 FE C:HDE761 0.0 12.8 0.5
FE C:HDD760 0.3 4.0 0.5
NA C:HDD760 1.9 3.1 0.5
NA C:HDE761 2.0 11.3 0.5
NB C:HDE761 2.0 11.4 0.5
NC C:HDE761 2.0 12.0 0.5
NB C:HDD760 2.1 8.0 0.5
ND C:HDE761 2.1 10.6 0.5
NC C:HDD760 2.1 4.6 0.5
OH C:TYR415 2.2 7.3 1.0
O C:HOH3277 2.2 16.3 1.0
ND C:HDD760 2.2 4.7 0.5
C4A C:HDD760 2.9 3.7 0.5
C1A C:HDD760 2.9 3.1 0.5
C1A C:HDE761 3.0 10.9 0.5
C4A C:HDE761 3.0 12.8 0.5
C1B C:HDD760 3.0 7.8 0.5
C1B C:HDE761 3.0 10.7 0.5
C4C C:HDE761 3.0 10.7 0.5
C4B C:HDE761 3.1 11.8 0.5
C4D C:HDE761 3.1 9.5 0.5
C1C C:HDE761 3.1 10.0 0.5
C4B C:HDD760 3.1 6.3 0.5
C4C C:HDD760 3.1 4.8 0.5
C1D C:HDE761 3.1 10.8 0.5
C1C C:HDD760 3.1 7.4 0.5
C4D C:HDD760 3.2 3.5 0.5
CZ C:TYR415 3.2 6.4 1.0
C1D C:HDD760 3.3 5.0 0.5
CHB C:HDD760 3.3 6.8 0.5
CHA C:HDE761 3.4 9.8 0.5
CHA C:HDD760 3.4 3.0 0.5
CHC C:HDE761 3.4 9.8 0.5
CHB C:HDE761 3.5 11.6 0.5
CHD C:HDE761 3.5 10.6 0.5
CHC C:HDD760 3.5 5.7 0.5
CHD C:HDD760 3.6 5.8 0.5
CE1 C:TYR415 3.8 6.3 1.0
O C:HOH1263 4.0 27.2 1.0
C3A C:HDD760 4.1 5.7 0.5
CE2 C:TYR415 4.1 7.9 1.0
C2A C:HDD760 4.2 3.1 0.5
C2B C:HDE761 4.2 11.8 0.5
C3B C:HDE761 4.3 9.5 0.5
C3C C:HDE761 4.3 8.4 0.5
C2B C:HDD760 4.3 8.4 0.5
NE C:ARG411 4.3 3.2 1.0
C3B C:HDD760 4.3 9.9 0.5
C3A C:HDE761 4.3 12.3 0.5
C2A C:HDE761 4.3 12.2 0.5
C2C C:HDE761 4.3 10.4 0.5
C3C C:HDD760 4.3 6.7 0.5
NE2 C:HIS128 4.3 7.2 1.0
C2C C:HDD760 4.3 5.7 0.5
NH2 C:ARG411 4.3 4.6 1.0
C2D C:HDE761 4.4 10.8 0.5
C3D C:HDE761 4.4 8.2 0.5
C3D C:HDD760 4.5 4.8 0.5
CD2 C:HIS128 4.5 3.9 1.0
CG2 C:VAL127 4.5 4.5 1.0
C2D C:HDD760 4.5 4.7 0.5
CZ C:PHE214 4.5 7.0 1.0
CZ C:ARG411 4.7 9.9 1.0

Iron binding site 7 out of 8 in 3pq6

Go back to Iron Binding Sites List in 3pq6
Iron binding site 7 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 25-30


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Structure of I274C Variant of E. Coli Kate[] - Images 25-30 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe760

b:2.9
occ:0.50
 FE D:HDD760 0.0 2.9 0.5
FE D:HDE761 0.4 13.7 0.5
NA D:HDE761 1.9 10.4 0.5
OH D:TYR415 1.9 7.6 1.0
NA D:HDD760 2.0 5.4 0.5
NB D:HDE761 2.0 11.1 0.5
NC D:HDD760 2.1 4.0 0.5
ND D:HDE761 2.1 9.7 0.5
NB D:HDD760 2.1 5.7 0.5
NC D:HDE761 2.2 10.7 0.5
ND D:HDD760 2.2 5.4 0.5
O D:HOH3252 2.6 15.3 1.0
CZ D:TYR415 2.8 5.6 1.0
C4A D:HDE761 2.9 11.6 0.5
C1A D:HDE761 2.9 12.4 0.5
C4A D:HDD760 3.0 2.9 0.5
C1B D:HDE761 3.0 8.7 0.5
C1A D:HDD760 3.0 2.9 0.5
C4B D:HDE761 3.1 10.8 0.5
C1C D:HDD760 3.1 4.6 0.5
C4C D:HDD760 3.1 2.9 0.5
C4D D:HDE761 3.1 7.0 0.5
C4C D:HDE761 3.1 8.7 0.5
C1B D:HDD760 3.1 3.0 0.5
C1C D:HDE761 3.2 10.5 0.5
C1D D:HDD760 3.2 2.9 0.5
C4B D:HDD760 3.2 5.0 0.5
C1D D:HDE761 3.2 7.3 0.5
C4D D:HDD760 3.3 3.2 0.5
CHB D:HDE761 3.4 8.4 0.5
CHB D:HDD760 3.4 3.0 0.5
CHA D:HDE761 3.4 5.5 0.5
CHD D:HDD760 3.4 2.9 0.5
CHC D:HDD760 3.5 6.8 0.5
CHC D:HDE761 3.5 9.7 0.5
CHA D:HDD760 3.5 2.8 0.5
CHD D:HDE761 3.6 7.7 0.5
CE1 D:TYR415 3.6 5.8 1.0
CE2 D:TYR415 3.8 7.7 1.0
NE D:ARG411 4.0 5.8 1.0
NH2 D:ARG411 4.2 6.2 1.0
C2B D:HDE761 4.2 11.1 0.5
C3A D:HDD760 4.2 2.9 0.5
C3A D:HDE761 4.2 12.7 0.5
C2A D:HDE761 4.2 11.1 0.5
C3B D:HDE761 4.2 10.5 0.5
C2A D:HDD760 4.2 2.9 0.5
C2C D:HDD760 4.3 5.2 0.5
C3C D:HDD760 4.3 4.6 0.5
C3C D:HDE761 4.3 9.1 0.5
C2C D:HDE761 4.3 12.8 0.5
C3B D:HDD760 4.4 8.2 0.5
C2B D:HDD760 4.4 3.9 0.5
C2D D:HDE761 4.4 5.8 0.5
C3D D:HDE761 4.4 4.2 0.5
C2D D:HDD760 4.4 4.6 0.5
CZ D:ARG411 4.5 8.3 1.0
C3D D:HDD760 4.5 2.8 0.5
O D:HOH1264 4.6 25.8 1.0
NE2 D:HIS128 4.6 6.2 1.0
CG2 D:VAL127 4.7 3.4 1.0
CZ D:PHE214 4.7 6.3 1.0
CD2 D:HIS128 4.8 2.9 1.0
CD1 D:TYR415 4.8 5.0 1.0
CD2 D:TYR415 4.9 6.2 1.0
O1A D:HDE761 4.9 15.3 0.5

Iron binding site 8 out of 8 in 3pq6

Go back to Iron Binding Sites List in 3pq6
Iron binding site 8 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 25-30


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Structure of I274C Variant of E. Coli Kate[] - Images 25-30 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe761

b:13.7
occ:0.50
 FE D:HDE761 0.0 13.7 0.5
FE D:HDD760 0.4 2.9 0.5
NA D:HDE761 1.9 10.4 0.5
NA D:HDD760 2.0 5.4 0.5
NB D:HDE761 2.0 11.1 0.5
NC D:HDE761 2.0 10.7 0.5
NB D:HDD760 2.1 5.7 0.5
ND D:HDE761 2.1 9.7 0.5
NC D:HDD760 2.1 4.0 0.5
O D:HOH3252 2.2 15.3 1.0
OH D:TYR415 2.2 7.6 1.0
ND D:HDD760 2.3 5.4 0.5
C4A D:HDD760 2.9 2.9 0.5
C1A D:HDE761 3.0 12.4 0.5
C4B D:HDE761 3.0 10.8 0.5
C1A D:HDD760 3.0 2.9 0.5
C4A D:HDE761 3.0 11.6 0.5
C1C D:HDE761 3.0 10.5 0.5
C4C D:HDE761 3.0 8.7 0.5
C1B D:HDD760 3.1 3.0 0.5
C4D D:HDE761 3.1 7.0 0.5
C1B D:HDE761 3.1 8.7 0.5
C1C D:HDD760 3.1 4.6 0.5
C4B D:HDD760 3.1 5.0 0.5
C1D D:HDE761 3.1 7.3 0.5
C4C D:HDD760 3.2 2.9 0.5
CZ D:TYR415 3.2 5.6 1.0
C1D D:HDD760 3.3 2.9 0.5
CHB D:HDD760 3.3 3.0 0.5
CHC D:HDE761 3.4 9.7 0.5
C4D D:HDD760 3.4 3.2 0.5
CHA D:HDE761 3.4 5.5 0.5
CHC D:HDD760 3.4 6.8 0.5
CHB D:HDE761 3.5 8.4 0.5
CHD D:HDE761 3.5 7.7 0.5
CHD D:HDD760 3.5 2.9 0.5
CHA D:HDD760 3.6 2.8 0.5
CE1 D:TYR415 3.9 5.8 1.0
CE2 D:TYR415 4.1 7.7 1.0
C3A D:HDD760 4.1 2.9 0.5
C2A D:HDD760 4.2 2.9 0.5
C3B D:HDE761 4.2 10.5 0.5
O D:HOH1264 4.2 25.8 1.0
NE D:ARG411 4.2 5.8 1.0
C2B D:HDE761 4.2 11.1 0.5
C3C D:HDE761 4.3 9.1 0.5
C2C D:HDE761 4.3 12.8 0.5
C2C D:HDD760 4.3 5.2 0.5
C3B D:HDD760 4.3 8.2 0.5
C2B D:HDD760 4.3 3.9 0.5
C2A D:HDE761 4.3 11.1 0.5
C3A D:HDE761 4.3 12.7 0.5
NE2 D:HIS128 4.3 6.2 1.0
C3C D:HDD760 4.3 4.6 0.5
C2D D:HDE761 4.4 5.8 0.5
NH2 D:ARG411 4.4 6.2 1.0
C3D D:HDE761 4.4 4.2 0.5
CG2 D:VAL127 4.4 3.4 1.0
CZ D:PHE214 4.5 6.3 1.0
CD2 D:HIS128 4.5 2.9 1.0
C2D D:HDD760 4.5 4.6 0.5
C3D D:HDD760 4.6 2.8 0.5
CZ D:ARG411 4.8 8.3 1.0

Reference:

V.Jha, S.Louis, P.Chelikani, X.Carpena, L.J.Donald, I.Fita, P.C.Loewen. Modulation of Heme Orientation and Binding By A Single Residue in Catalase Hpii of Escherichia Coli. Biochemistry V. 50 2101 2011.
ISSN: ISSN 0006-2960
PubMed: 21332158
DOI: 10.1021/BI200027V
Page generated: Tue Aug 5 05:51:41 2025

Last articles

Fe in 6CDK
Fe in 6CII
Fe in 6CFW
Fe in 6CIF
Fe in 6CIE
Fe in 6CID
Fe in 6CIC
Fe in 6CHI
Fe in 6CI0
Fe in 6CH6
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy