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Iron in PDB 3qjc: Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form

Protein crystallography data

The structure of Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form, PDB code: 3qjc was solved by I.Birukou, J.Soman, J.S.Olson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 51.37 / 2.00
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 53.300, 53.300, 192.700, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 25

Iron Binding Sites:

The binding sites of Iron atom in the Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form (pdb code 3qjc). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form, PDB code: 3qjc:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3qjc

Go back to Iron Binding Sites List in 3qjc
Iron binding site 1 out of 2 in the Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe142

b:20.4
occ:1.00
FE A:HEM142 0.0 20.4 1.0
C A:CMO143 1.8 15.7 1.0
NC A:HEM142 2.0 17.7 1.0
NB A:HEM142 2.0 18.5 1.0
NA A:HEM142 2.1 19.0 1.0
ND A:HEM142 2.1 17.2 1.0
NE2 A:HIS87 2.2 15.6 1.0
O A:CMO143 3.0 28.5 1.0
C4B A:HEM142 3.0 18.5 1.0
C1C A:HEM142 3.0 18.7 1.0
C4C A:HEM142 3.0 16.5 1.0
C1B A:HEM142 3.1 19.4 1.0
C1A A:HEM142 3.1 22.6 1.0
C4A A:HEM142 3.1 15.7 1.0
C1D A:HEM142 3.1 14.3 1.0
C4D A:HEM142 3.1 19.5 1.0
CE1 A:HIS87 3.2 24.9 1.0
CD2 A:HIS87 3.2 24.2 1.0
CHC A:HEM142 3.4 18.3 1.0
CHD A:HEM142 3.5 19.4 1.0
CHA A:HEM142 3.5 16.8 1.0
CHB A:HEM142 3.5 15.7 1.0
C3B A:HEM142 4.3 17.9 1.0
C2C A:HEM142 4.3 26.2 1.0
C3C A:HEM142 4.3 19.1 1.0
ND1 A:HIS87 4.3 22.4 1.0
C2B A:HEM142 4.3 17.9 1.0
C2A A:HEM142 4.3 20.2 1.0
CG A:HIS87 4.3 25.9 1.0
C3A A:HEM142 4.3 22.2 1.0
C2D A:HEM142 4.3 14.4 1.0
C3D A:HEM142 4.4 19.7 1.0
NE2 A:HIS58 4.4 20.4 1.0
CD1 A:LEU91 5.0 21.9 1.0

Iron binding site 2 out of 2 in 3qjc

Go back to Iron Binding Sites List in 3qjc
Iron binding site 2 out of 2 in the Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe147

b:23.6
occ:1.00
FE B:HEM147 0.0 23.6 1.0
C B:CMO148 1.6 21.0 1.0
NA B:HEM147 2.0 23.3 1.0
NB B:HEM147 2.1 18.2 1.0
NE2 B:HIS92 2.1 22.1 1.0
NC B:HEM147 2.1 22.4 1.0
ND B:HEM147 2.1 22.4 1.0
O B:CMO148 2.8 21.7 1.0
C4A B:HEM147 3.0 21.7 1.0
C1A B:HEM147 3.1 21.9 1.0
CD2 B:HIS92 3.1 23.1 1.0
CE1 B:HIS92 3.1 25.2 1.0
C1B B:HEM147 3.1 18.0 1.0
C4B B:HEM147 3.1 21.0 1.0
C4D B:HEM147 3.1 22.7 1.0
C4C B:HEM147 3.1 24.7 1.0
C1C B:HEM147 3.1 19.4 1.0
C1D B:HEM147 3.1 24.7 1.0
CHA B:HEM147 3.4 20.6 1.0
CHB B:HEM147 3.4 20.2 1.0
CHC B:HEM147 3.5 18.4 1.0
CHD B:HEM147 3.5 20.4 1.0
ND1 B:HIS92 4.2 25.5 1.0
CG B:HIS92 4.2 23.2 1.0
C3A B:HEM147 4.2 19.0 1.0
C2A B:HEM147 4.3 20.0 1.0
C3C B:HEM147 4.3 18.9 1.0
C3B B:HEM147 4.3 19.9 1.0
C2B B:HEM147 4.3 25.2 1.0
C2C B:HEM147 4.3 17.8 1.0
C3D B:HEM147 4.3 25.3 1.0
C2D B:HEM147 4.4 28.0 1.0
CG2 B:VAL67 4.7 18.0 1.0

Reference:

I.Birukou, J.Soman, J.S.Olson. Determination of Pathways For Oxygen Binding to Human Hba Thesis.
Page generated: Sun Aug 4 18:43:09 2024

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