Iron in PDB 3ryg: 128 Hours Neutron Structure of Perdeuterated Rubredoxin

The binding sites of Iron atom in the 128 Hours Neutron Structure of Perdeuterated Rubredoxin (pdb code 3ryg). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the 128 Hours Neutron Structure of Perdeuterated Rubredoxin, PDB code: 3ryg:

Iron binding site 1 out of 1 in the 128 Hours Neutron Structure of Perdeuterated Rubredoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of 128 Hours Neutron Structure of Perdeuterated Rubredoxin within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe54 b:10.9 occ:1.00 SG A:CYS5 2.3 9.6 1.0 SG A:CYS38 2.4 8.2 1.0 SG A:CYS8 2.4 10.6 1.0 SG A:CYS41 2.5 13.4 1.0 DB3 A:CYS8 3.0 17.1 1.0 D A:CYS8 3.1 12.7 1.0 DB3 A:CYS5 3.2 10.8 1.0 D A:CYS41 3.2 18.5 1.0 DB3 A:CYS41 3.2 16.4 1.0 CB A:CYS5 3.2 11.2 1.0 CB A:CYS8 3.3 17.7 1.0 CB A:CYS38 3.3 13.7 1.0 DB3 A:CYS38 3.3 8.1 1.0 DB2 A:CYS5 3.4 8.4 1.0 DB2 A:CYS38 3.4 8.8 1.0 CB A:CYS41 3.4 15.1 1.0 DB A:ILE7 3.4 15.5 1.0 DB3 A:TYR10 3.6 8.8 1.0 DB A:ILE40 3.7 13.3 1.0 N A:CYS8 3.7 14.6 1.0 N A:CYS41 3.8 14.9 1.0 DB3 A:ALA43 3.9 12.9 1.0 D A:TYR10 4.0 10.8 0.2 H A:TYR10 4.0 10.8 0.8 CA A:CYS8 4.1 14.1 1.0 DB2 A:CYS8 4.1 15.9 1.0 D A:ALA43 4.1 18.1 1.0 CA A:CYS41 4.1 11.7 1.0 DB2 A:CYS41 4.2 12.7 1.0 DB2 A:ALA43 4.3 13.7 1.0 DB2 A:TYR10 4.4 10.5 1.0 CB A:ILE7 4.4 11.4 1.0 CB A:TYR10 4.4 8.4 1.0 D A:ILE7 4.5 16.3 1.0 CB A:ALA43 4.5 21.3 1.0 D A:ILE40 4.6 12.3 1.0 CB A:ILE40 4.6 13.6 1.0 D A:GLY9 4.6 17.7 1.0 CA A:CYS5 4.6 10.0 1.0 D A:GLY42 4.7 13.7 1.0 DG22 A:ILE7 4.7 20.4 1.0 DZ A:PHE48 4.7 13.0 1.0 C A:ILE7 4.7 15.7 1.0 CA A:CYS38 4.7 7.1 1.0 C A:CYS41 4.8 9.4 1.0 C A:CYS8 4.8 11.7 1.0 N A:TYR10 4.8 10.6 1.0 DA A:CYS8 4.9 13.2 1.0 N A:GLY9 4.9 14.5 1.0 C A:ILE40 4.9 17.8 1.0 N A:ALA43 4.9 9.2 1.0 N A:GLY42 4.9 9.5 1.0 CA A:ILE7 4.9 12.2 1.0 DG22 A:ILE40 5.0 23.2 1.0 DD2 A:TYR10 5.0 8.1 1.0 DA A:CYS41 5.0 13.1 1.0 DA A:CYS5 5.0 9.2 1.0

P.Munshi, S.L.Chung, M.P.Blakeley, K.L.Weiss, D.A.Myles, F.Meilleur. Rapid Visualization of Hydrogen Positions in Protein Neutron Crystallographic Structures. Acta Crystallogr.,Sect.D V. 68 35 2012.
ISSN: ISSN 0907-4449
PubMed: 22194331
DOI: 10.1107/S0907444911048402