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Iron in PDB 3rzt: Neutron Structure of Perdeuterated Rubredoxin Using Rapid (14 Hours) Data

Iron Binding Sites:

The binding sites of Iron atom in the Neutron Structure of Perdeuterated Rubredoxin Using Rapid (14 Hours) Data (pdb code 3rzt). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Neutron Structure of Perdeuterated Rubredoxin Using Rapid (14 Hours) Data, PDB code: 3rzt:

Iron binding site 1 out of 1 in 3rzt

Go back to Iron Binding Sites List in 3rzt
Iron binding site 1 out of 1 in the Neutron Structure of Perdeuterated Rubredoxin Using Rapid (14 Hours) Data


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Neutron Structure of Perdeuterated Rubredoxin Using Rapid (14 Hours) Data within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe54

b:13.4
occ:1.00
SG A:CYS41 2.2 9.6 1.0
SG A:CYS8 2.2 10.2 1.0
SG A:CYS38 2.4 9.6 1.0
SG A:CYS5 2.4 10.1 1.0
DB3 A:CYS5 3.0 11.6 1.0
D A:CYS41 3.1 13.5 1.0
DB3 A:CYS38 3.1 11.8 1.0
CB A:CYS5 3.1 9.7 1.0
CB A:CYS38 3.2 9.5 1.0
DB3 A:CYS8 3.2 13.9 1.0
D A:CYS8 3.2 13.7 1.0
DB2 A:CYS38 3.3 11.8 1.0
DB3 A:CYS41 3.3 12.9 1.0
CB A:CYS8 3.3 10.9 1.0
DB2 A:CYS5 3.3 11.6 0.0
CB A:CYS41 3.4 9.8 1.0
DB A:ILE7 3.5 15.5 1.0
DB3 A:TYR10 3.5 12.5 0.0
DB A:ILE40 3.6 14.1 1.0
DB3 A:ALA43 3.7 15.5 0.0
N A:CYS8 3.8 10.6 1.0
N A:CYS41 3.8 10.3 1.0
D A:ALA43 4.0 12.7 1.0
H A:TYR10 4.1 12.5 0.8
D A:TYR10 4.1 12.5 0.2
DB2 A:CYS8 4.1 13.9 1.0
CA A:CYS41 4.1 10.7 1.0
CA A:CYS8 4.1 10.3 1.0
DB2 A:ALA43 4.1 15.5 0.0
DB2 A:CYS41 4.1 12.9 1.0
CB A:ALA43 4.4 12.0 1.0
CB A:TYR10 4.4 12.1 1.0
CB A:ILE7 4.4 13.8 1.0
DB2 A:TYR10 4.4 12.5 1.0
D A:ILE40 4.4 13.7 0.4
H A:ILE40 4.4 13.7 0.6
D A:ILE7 4.5 13.3 1.0
CB A:ILE40 4.5 17.4 1.0
D A:GLY42 4.5 12.6 1.0
D A:GLY9 4.6 12.5 1.0
CA A:CYS5 4.6 8.6 1.0
DG22 A:ILE7 4.6 20.7 1.0
CA A:CYS38 4.6 9.4 1.0
DZ A:PHE48 4.7 14.0 1.0
C A:CYS41 4.7 9.9 1.0
C A:ILE7 4.7 12.3 1.0
C A:CYS8 4.7 9.6 1.0
N A:GLY42 4.8 12.1 1.0
N A:ALA43 4.8 9.2 1.0
N A:GLY9 4.9 12.1 1.0
N A:TYR10 4.9 12.1 1.0
DD2 A:TYR10 4.9 12.5 1.0
C A:ILE40 4.9 17.9 1.0
DG21 A:ILE40 4.9 19.1 0.0
DA A:CYS8 4.9 13.3 1.0
DA A:CYS41 4.9 13.8 1.0
DA A:CYS5 4.9 10.4 1.0
C A:CYS5 5.0 9.7 1.0
DA A:CYS38 5.0 11.7 1.0
O A:CYS5 5.0 10.8 1.0
DG22 A:ILE40 5.0 19.1 0.0
CG2 A:ILE7 5.0 19.1 1.0
CA A:ILE7 5.0 13.3 1.0

Reference:

P.Munshi, S.L.Chung, M.P.Blakeley, K.L.Weiss, D.A.Myles, F.Meilleur. Rapid Visualization of Hydrogen Positions in Protein Neutron Crystallographic Structures. Acta Crystallogr.,Sect.D V. 68 35 2012.
ISSN: ISSN 0907-4449
PubMed: 22194331
DOI: 10.1107/S0907444911048402
Page generated: Tue Aug 5 06:38:43 2025

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