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Iron in PDB 3swj: Crystal Structure of Campylobacter Jejuni Chuz

Protein crystallography data

The structure of Crystal Structure of Campylobacter Jejuni Chuz, PDB code: 3swj was solved by Y.Hu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.41 / 2.41
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 106.474, 106.698, 52.464, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 26

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Campylobacter Jejuni Chuz (pdb code 3swj). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of Campylobacter Jejuni Chuz, PDB code: 3swj:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3swj

Go back to Iron Binding Sites List in 3swj
Iron binding site 1 out of 2 in the Crystal Structure of Campylobacter Jejuni Chuz


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Campylobacter Jejuni Chuz within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe300

b:49.7
occ:1.00
FE A:HEM300 0.0 49.7 1.0
NC A:HEM300 2.0 71.5 1.0
NB A:HEM300 2.1 53.7 1.0
NA A:HEM300 2.1 53.2 1.0
ND A:HEM300 2.1 55.7 1.0
NE2 A:HIS245 2.3 39.4 1.0
N1 A:AZI301 2.7 67.4 1.0
C4C A:HEM300 3.0 58.8 1.0
C4B A:HEM300 3.1 63.5 1.0
C1C A:HEM300 3.1 59.9 1.0
C1D A:HEM300 3.1 67.1 1.0
C1B A:HEM300 3.1 52.3 1.0
C4A A:HEM300 3.1 47.3 1.0
CD2 A:HIS245 3.1 43.3 1.0
C1A A:HEM300 3.1 51.7 1.0
C4D A:HEM300 3.2 54.0 1.0
CE1 A:HIS245 3.3 54.1 1.0
CHD A:HEM300 3.4 60.4 1.0
CHC A:HEM300 3.4 54.1 1.0
CHB A:HEM300 3.5 59.6 1.0
N2 A:AZI301 3.5 84.6 1.0
CHA A:HEM300 3.5 54.4 1.0
C3C A:HEM300 4.2 72.7 1.0
C2C A:HEM300 4.3 72.2 1.0
C3B A:HEM300 4.3 62.2 1.0
C2B A:HEM300 4.3 64.0 1.0
CG A:HIS245 4.3 59.8 1.0
C3A A:HEM300 4.3 63.4 1.0
C2D A:HEM300 4.3 68.6 1.0
C2A A:HEM300 4.4 61.1 1.0
C3D A:HEM300 4.4 66.5 1.0
ND1 A:HIS245 4.4 59.9 1.0
N3 A:AZI301 4.4 72.6 1.0
N A:GLY225 4.4 65.0 1.0

Iron binding site 2 out of 2 in 3swj

Go back to Iron Binding Sites List in 3swj
Iron binding site 2 out of 2 in the Crystal Structure of Campylobacter Jejuni Chuz


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Campylobacter Jejuni Chuz within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe302

b:0.1
occ:0.50
FE A:HEM302 0.0 0.1 0.5
NA A:HEM302 2.0 90.0 0.5
NB A:HEM302 2.0 80.7 0.5
ND A:HEM302 2.0 80.7 0.5
NC A:HEM302 2.0 89.9 0.5
C1B A:HEM302 3.0 89.7 0.5
C1D A:HEM302 3.0 89.9 0.5
C4A A:HEM302 3.0 86.6 0.5
C4D A:HEM302 3.0 88.0 0.5
C4C A:HEM302 3.0 86.7 0.5
C1C A:HEM302 3.0 90.1 0.5
C1A A:HEM302 3.0 90.0 0.5
C4B A:HEM302 3.1 88.0 0.5
CHB A:HEM302 3.3 86.4 0.5
CHD A:HEM302 3.4 86.5 0.5
CHA A:HEM302 3.4 86.7 0.5
CHC A:HEM302 3.4 86.7 0.5
C3A A:HEM302 4.3 89.8 0.5
C2A A:HEM302 4.3 93.3 0.5
C3B A:HEM302 4.3 89.9 0.5
C2B A:HEM302 4.3 88.2 0.5
C3D A:HEM302 4.3 89.9 0.5
C2D A:HEM302 4.3 88.2 0.5
C2C A:HEM302 4.3 93.4 0.5
C3C A:HEM302 4.3 90.0 0.5
CE1 A:HIS9 4.4 0.6 1.0
CE1 A:HIS14 4.7 0.0 1.0

Reference:

R.Zhang, J.Zhang, G.Guo, X.Mao, W.Tong, Y.Zhang, D.C.Wang, Y.Hu, Q.Zou. Crystal Structure of Campylobacter Jejuni Chuz: A Split-Barrel Family Heme Oxygenase with A Novel Heme-Binding Mode. Biochem.Biophys.Res.Commun. V. 415 82 2011.
ISSN: ISSN 0006-291X
PubMed: 22020097
DOI: 10.1016/J.BBRC.2011.10.016
Page generated: Sun Aug 4 20:03:31 2024

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