Atomistry » Iron » PDB 3v3y-3vks » 3vew
Atomistry »
  Iron »
    PDB 3v3y-3vks »
      3vew »

Iron in PDB 3vew: Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Adp

Protein crystallography data

The structure of Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Adp, PDB code: 3vew was solved by C.Parthier, M.T.Stubbs, S.Goerlich, F.Jaenecke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.28 / 2.35
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 98.022, 98.022, 280.697, 90.00, 90.00, 120.00
R / Rfree (%) 20.6 / 24.9

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Adp (pdb code 3vew). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Adp, PDB code: 3vew:

Iron binding site 1 out of 1 in 3vew

Go back to Iron Binding Sites List in 3vew
Iron binding site 1 out of 1 in the Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Adp


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe602

b:37.3
occ:1.00
O3B A:ADP601 2.1 44.9 1.0
NE2 A:HIS118 2.2 31.3 1.0
O1A A:ADP601 2.2 40.7 1.0
NE2 A:HIS114 2.2 32.6 1.0
OD2 A:ASP338 2.3 39.9 1.0
OD1 A:ASP137 2.5 46.0 1.0
OD2 A:ASP137 2.6 44.1 1.0
CG A:ASP137 2.8 41.8 1.0
CD2 A:HIS118 3.0 28.6 1.0
CD2 A:HIS114 3.0 36.0 1.0
CE1 A:HIS118 3.3 35.2 1.0
PB A:ADP601 3.3 50.1 1.0
CG A:ASP338 3.3 38.9 1.0
CE1 A:HIS114 3.3 40.2 1.0
PA A:ADP601 3.3 39.6 1.0
O3A A:ADP601 3.4 44.1 1.0
OD1 A:ASP338 3.6 42.4 1.0
O1B A:ADP601 4.0 49.5 1.0
CG A:HIS118 4.2 31.0 1.0
CG A:HIS114 4.2 37.4 1.0
CB A:ASP137 4.3 40.9 1.0
ND1 A:HIS118 4.3 32.6 1.0
ND1 A:HIS114 4.3 38.8 1.0
O5' A:ADP601 4.4 42.5 1.0
O2A A:ADP601 4.5 36.6 1.0
O2B A:ADP601 4.5 47.7 1.0
CB A:ASP338 4.6 36.5 1.0
CA A:GLY309 4.8 33.5 1.0
CA A:ASP338 4.8 35.0 1.0
N A:ASP338 4.9 32.9 1.0
O A:GLN139 4.9 37.5 1.0
N A:GLY310 4.9 28.8 1.0
CZ2 A:TRP71 5.0 32.9 1.0
CD2 A:HIS115 5.0 35.4 1.0

Reference:

C.Parthier, S.Gorlich, F.Jaenecke, C.Breithaupt, U.Brauer, U.Fandrich, D.Clausnitzer, U.F.Wehmeier, C.Bottcher, D.Scheel, M.T.Stubbs. The O-Carbamoyltransferase Tobz Catalyzes An Ancient Enzymatic Reaction. Angew.Chem.Int.Ed.Engl. V. 51 4046 2012.
ISSN: ISSN 1433-7851
PubMed: 22383337
DOI: 10.1002/ANIE.201108896
Page generated: Sun Aug 4 21:53:50 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy