Atomistry » Iron » PDB 3vkt-3vti » 3vlj
Atomistry »
  Iron »
    PDB 3vkt-3vti »
      3vlj »

Iron in PDB 3vlj: Crystal Structure Analysis of the Cyanide ARG409LEU Variant Complexes with O-Dianisidine in Katg From Haloarcula Marismortui

Enzymatic activity of Crystal Structure Analysis of the Cyanide ARG409LEU Variant Complexes with O-Dianisidine in Katg From Haloarcula Marismortui

All present enzymatic activity of Crystal Structure Analysis of the Cyanide ARG409LEU Variant Complexes with O-Dianisidine in Katg From Haloarcula Marismortui:
1.11.1.21;

Protein crystallography data

The structure of Crystal Structure Analysis of the Cyanide ARG409LEU Variant Complexes with O-Dianisidine in Katg From Haloarcula Marismortui, PDB code: 3vlj was solved by T.Sato, W.Higuchi, K.Yoshimatsu, T.Fujiwara, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.74 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 315.209, 80.762, 75.433, 90.00, 99.50, 90.00
R / Rfree (%) 21.6 / 23.4

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure Analysis of the Cyanide ARG409LEU Variant Complexes with O-Dianisidine in Katg From Haloarcula Marismortui (pdb code 3vlj). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure Analysis of the Cyanide ARG409LEU Variant Complexes with O-Dianisidine in Katg From Haloarcula Marismortui, PDB code: 3vlj:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3vlj

Go back to Iron Binding Sites List in 3vlj
Iron binding site 1 out of 2 in the Crystal Structure Analysis of the Cyanide ARG409LEU Variant Complexes with O-Dianisidine in Katg From Haloarcula Marismortui


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure Analysis of the Cyanide ARG409LEU Variant Complexes with O-Dianisidine in Katg From Haloarcula Marismortui within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe800

b:11.8
occ:1.00
FE A:HEM800 0.0 11.8 1.0
NB A:HEM800 2.1 10.8 1.0
ND A:HEM800 2.1 10.5 1.0
NC A:HEM800 2.1 8.9 1.0
NA A:HEM800 2.1 10.1 1.0
NE2 A:HIS259 2.2 12.0 1.0
C A:CYN802 2.8 34.3 1.0
C4D A:HEM800 3.1 11.7 1.0
C4C A:HEM800 3.1 12.2 1.0
CD2 A:HIS259 3.1 8.2 1.0
C1D A:HEM800 3.1 12.1 1.0
C4B A:HEM800 3.1 12.7 1.0
C1C A:HEM800 3.1 10.1 1.0
C1A A:HEM800 3.1 11.4 1.0
C1B A:HEM800 3.1 12.9 1.0
C4A A:HEM800 3.1 12.9 1.0
CE1 A:HIS259 3.2 9.6 1.0
N A:CYN802 3.2 36.4 1.0
CHB A:HEM800 3.3 14.0 1.0
CHC A:HEM800 3.3 12.1 1.0
CHA A:HEM800 3.4 9.5 1.0
CHD A:HEM800 3.4 12.4 1.0
CG A:HIS259 4.3 11.2 1.0
C3C A:HEM800 4.3 9.3 1.0
ND1 A:HIS259 4.3 10.6 1.0
C2A A:HEM800 4.3 9.7 1.0
C3D A:HEM800 4.3 10.7 1.0
C2D A:HEM800 4.3 11.6 1.0
C2C A:HEM800 4.3 9.1 1.0
NE1 A:TRP95 4.3 13.5 1.0
C3B A:HEM800 4.3 11.7 1.0
C2B A:HEM800 4.4 13.9 1.0
C3A A:HEM800 4.4 11.0 1.0
CD1 A:TRP95 4.5 13.8 1.0
CH2 A:TRP311 4.7 10.8 1.0
O A:HOH1114 4.7 29.2 1.0
CZ2 A:TRP311 4.8 11.1 1.0

Iron binding site 2 out of 2 in 3vlj

Go back to Iron Binding Sites List in 3vlj
Iron binding site 2 out of 2 in the Crystal Structure Analysis of the Cyanide ARG409LEU Variant Complexes with O-Dianisidine in Katg From Haloarcula Marismortui


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure Analysis of the Cyanide ARG409LEU Variant Complexes with O-Dianisidine in Katg From Haloarcula Marismortui within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe800

b:19.3
occ:1.00
FE B:HEM800 0.0 19.3 1.0
NB B:HEM800 2.1 18.1 1.0
ND B:HEM800 2.1 17.0 1.0
NC B:HEM800 2.1 16.4 1.0
NA B:HEM800 2.1 16.9 1.0
NE2 B:HIS259 2.2 18.8 1.0
N B:CYN802 2.4 34.4 1.0
C B:CYN802 3.0 37.0 1.0
CD2 B:HIS259 3.0 20.9 1.0
C4C B:HEM800 3.1 17.5 1.0
C1B B:HEM800 3.1 19.9 1.0
C4A B:HEM800 3.1 19.1 1.0
C4D B:HEM800 3.1 17.4 1.0
C1D B:HEM800 3.1 17.6 1.0
C4B B:HEM800 3.1 19.5 1.0
C1C B:HEM800 3.2 18.1 1.0
C1A B:HEM800 3.2 17.9 1.0
CHB B:HEM800 3.2 19.5 1.0
CHD B:HEM800 3.2 17.3 1.0
CE1 B:HIS259 3.3 19.8 1.0
CHA B:HEM800 3.3 17.6 1.0
CHC B:HEM800 3.3 18.6 1.0
CG B:HIS259 4.3 20.8 1.0
NE1 B:TRP95 4.3 19.0 1.0
C3C B:HEM800 4.3 16.1 1.0
C3D B:HEM800 4.3 17.9 1.0
ND1 B:HIS259 4.3 20.6 1.0
C2A B:HEM800 4.4 17.3 1.0
C2C B:HEM800 4.4 17.5 1.0
C3B B:HEM800 4.4 20.1 1.0
C2B B:HEM800 4.4 19.6 1.0
C3A B:HEM800 4.4 19.4 1.0
C2D B:HEM800 4.5 17.7 1.0
CD1 B:TRP95 4.5 19.7 1.0
CH2 B:TRP311 4.6 19.8 1.0
O B:HOH912 4.7 41.2 1.0
CZ2 B:TRP311 4.9 19.9 1.0

Reference:

T.Sato, W.Higuchi, K.Yoshimatsu, T.Fujiwara. Crystal Structures and Peroxidatic Function of Cyanide ARG409LEU Variant and Its Complexes with O-Dianisidine in Katg From Haloarcula Marismortui To Be Published.
Page generated: Tue Aug 5 07:56:59 2025

Last articles

Na in 7M44
Na in 7M3S
Na in 7M0D
Na in 7M0E
Na in 7M3Q
Na in 7M2L
Na in 7M1Y
Na in 7M14
Na in 7M0C
Na in 7LU6
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy