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Iron in PDB 4bja: Globin-Like Protein Glb-12 From C.Elegans

Protein crystallography data

The structure of Globin-Like Protein Glb-12 From C.Elegans, PDB code: 4bja was solved by S.De Henau, L.Tilleman, F.Germani, M.Pauwels, C.Vlaeminck, J.R.Vanfleteren, W.Bert, A.Pesce, M.Nardini, M.Bolognesi, K.De Wael, L.Moens, S.Dewilde, B.P.Braeckman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.68 / 1.65
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 50.440, 50.440, 245.270, 90.00, 90.00, 120.00
R / Rfree (%) 17.827 / 23.414

Iron Binding Sites:

The binding sites of Iron atom in the Globin-Like Protein Glb-12 From C.Elegans (pdb code 4bja). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Globin-Like Protein Glb-12 From C.Elegans, PDB code: 4bja:

Iron binding site 1 out of 1 in 4bja

Go back to Iron Binding Sites List in 4bja
Iron binding site 1 out of 1 in the Globin-Like Protein Glb-12 From C.Elegans


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Globin-Like Protein Glb-12 From C.Elegans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe300

b:19.7
occ:1.00
FE A:HEM300 0.0 19.7 1.0
NA A:HEM300 2.0 19.9 1.0
NB A:HEM300 2.0 20.6 1.0
ND A:HEM300 2.0 24.1 1.0
NC A:HEM300 2.0 22.8 1.0
NE2 A:HIS127 2.0 17.9 1.0
NE2 A:HIS92 2.1 18.7 1.0
CE1 A:HIS127 3.0 18.0 1.0
C4A A:HEM300 3.0 20.3 1.0
C4D A:HEM300 3.0 24.3 1.0
C1D A:HEM300 3.0 25.1 1.0
C1A A:HEM300 3.0 21.3 1.0
C4C A:HEM300 3.0 24.4 1.0
C1B A:HEM300 3.0 19.9 1.0
C1C A:HEM300 3.1 21.3 1.0
C4B A:HEM300 3.1 20.6 1.0
CD2 A:HIS92 3.1 17.9 1.0
CD2 A:HIS127 3.1 18.9 1.0
CE1 A:HIS92 3.1 20.8 1.0
CHD A:HEM300 3.4 24.4 1.0
CHA A:HEM300 3.4 22.4 1.0
CHB A:HEM300 3.4 19.7 1.0
CHC A:HEM300 3.4 22.0 1.0
ND1 A:HIS127 4.1 20.4 1.0
CG A:HIS127 4.2 19.1 1.0
C2D A:HEM300 4.2 26.5 1.0
C3D A:HEM300 4.2 27.8 1.0
C3A A:HEM300 4.2 21.2 1.0
CG A:HIS92 4.2 17.9 1.0
ND1 A:HIS92 4.2 20.0 1.0
C2A A:HEM300 4.2 23.1 1.0
C3C A:HEM300 4.2 23.8 1.0
C2C A:HEM300 4.3 24.5 1.0
C2B A:HEM300 4.3 19.8 1.0
C3B A:HEM300 4.3 20.7 1.0
O A:HOH2082 4.7 34.8 1.0

Reference:

S.De Henau, L.Tilleman, F.Germani, M.Pauwels, C.Vlaeminck, J.R.Vanfleteren, W.Bert, A.Pesce, M.Nardini, M.Bolognesi, K.De Wael, L.Moens, S.Dewilde, B.P.Braeckman. A Redox Signaling Globin Regulates Germ Cell Apoptosis in Caenorhabditis Elegans To Be Published.
Page generated: Mon Aug 5 00:02:39 2024

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