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Iron in PDB 4dc8: Crystal Structure of Myoglobin Unexposed to Excessive Sonicc Imaging Laser Dose.

Protein crystallography data

The structure of Crystal Structure of Myoglobin Unexposed to Excessive Sonicc Imaging Laser Dose., PDB code: 4dc8 was solved by M.Becker, A.M.Mulichak, D.J.Kissick, R.F.Fischetti, L.J.Keefe, D.J.Simpson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.99 / 1.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 35.363, 28.794, 63.056, 90.00, 106.05, 90.00
R / Rfree (%) 18.3 / 21.8

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Myoglobin Unexposed to Excessive Sonicc Imaging Laser Dose. (pdb code 4dc8). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Myoglobin Unexposed to Excessive Sonicc Imaging Laser Dose., PDB code: 4dc8:

Iron binding site 1 out of 1 in 4dc8

Go back to Iron Binding Sites List in 4dc8
Iron binding site 1 out of 1 in the Crystal Structure of Myoglobin Unexposed to Excessive Sonicc Imaging Laser Dose.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Myoglobin Unexposed to Excessive Sonicc Imaging Laser Dose. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:9.6
occ:1.00
FE A:HEM201 0.0 9.6 1.0
NA A:HEM201 2.0 9.6 1.0
NB A:HEM201 2.0 9.0 1.0
ND A:HEM201 2.0 9.8 1.0
O A:HOH415 2.0 9.8 1.0
NC A:HEM201 2.0 9.0 1.0
NE2 A:HIS93 2.1 8.7 1.0
C4D A:HEM201 3.0 8.3 1.0
C1D A:HEM201 3.0 9.2 1.0
C1A A:HEM201 3.0 10.0 1.0
C4C A:HEM201 3.0 8.5 1.0
C4A A:HEM201 3.0 9.8 1.0
C4B A:HEM201 3.0 9.9 1.0
C1C A:HEM201 3.1 8.1 1.0
CE1 A:HIS93 3.1 11.7 1.0
C1B A:HEM201 3.1 10.1 1.0
CD2 A:HIS93 3.1 9.4 1.0
CHD A:HEM201 3.4 9.7 1.0
CHB A:HEM201 3.4 10.1 1.0
CHA A:HEM201 3.4 8.7 1.0
CHC A:HEM201 3.4 7.8 1.0
ND1 A:HIS93 4.2 11.3 1.0
CG A:HIS93 4.2 11.3 1.0
C2D A:HEM201 4.3 10.2 1.0
C2A A:HEM201 4.3 9.4 1.0
C3C A:HEM201 4.3 9.2 1.0
C2C A:HEM201 4.3 9.2 1.0
C2B A:HEM201 4.3 10.8 1.0
C3A A:HEM201 4.3 9.1 1.0
C3B A:HEM201 4.3 10.7 1.0
C3D A:HEM201 4.3 11.4 1.0
NE2 A:HIS64 4.3 9.5 1.0
CG2 A:VAL68 4.7 8.9 1.0
CE1 A:HIS64 4.9 12.5 1.0

Reference:

D.J.Kissick, C.M.Dettmar, M.Becker, A.M.Mulichak, V.Cherezov, S.L.Ginell, K.P.Battaile, L.J.Keefe, R.F.Fischetti, G.J.Simpson. Towards Protein-Crystal Centering Using Second-Harmonic Generation (Shg) Microscopy. Acta Crystallogr.,Sect.D V. 69 843 2013.
ISSN: ISSN 0907-4449
PubMed: 23633594
DOI: 10.1107/S0907444913002746
Page generated: Mon Aug 5 01:13:31 2024

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