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Iron in PDB 4h07: Complex of G65T Myoglobin with Phenol in Its Proximal Cavity

Protein crystallography data

The structure of Complex of G65T Myoglobin with Phenol in Its Proximal Cavity, PDB code: 4h07 was solved by L.Lebioda, L.L.Lovelace, L.R.Celeste, X.Huang, C.Wang, S.Shengfang, J.H.Dawson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.13 / 1.14
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 90.531, 90.531, 45.158, 90.00, 90.00, 120.00
R / Rfree (%) 13.3 / 15.3

Iron Binding Sites:

The binding sites of Iron atom in the Complex of G65T Myoglobin with Phenol in Its Proximal Cavity (pdb code 4h07). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Complex of G65T Myoglobin with Phenol in Its Proximal Cavity, PDB code: 4h07:

Iron binding site 1 out of 1 in 4h07

Go back to Iron Binding Sites List in 4h07
Iron binding site 1 out of 1 in the Complex of G65T Myoglobin with Phenol in Its Proximal Cavity


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Complex of G65T Myoglobin with Phenol in Its Proximal Cavity within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:6.0
occ:1.00
FE A:HEM201 0.0 6.0 1.0
ND A:HEM201 2.0 6.9 1.0
NB A:HEM201 2.0 6.0 1.0
NA A:HEM201 2.0 6.5 1.0
NE2 A:HIS93 2.1 6.0 1.0
NC A:HEM201 2.1 6.4 1.0
O A:HOH302 2.1 8.5 1.0
CE1 A:HIS93 3.0 7.6 1.0
C1D A:HEM201 3.0 7.2 1.0
C4D A:HEM201 3.0 6.8 1.0
C4B A:HEM201 3.1 6.3 1.0
C4C A:HEM201 3.1 6.0 1.0
C1B A:HEM201 3.1 5.9 1.0
C1A A:HEM201 3.1 6.3 1.0
C4A A:HEM201 3.1 5.7 1.0
C1C A:HEM201 3.1 6.1 1.0
CD2 A:HIS93 3.1 6.5 1.0
CHD A:HEM201 3.4 7.0 1.0
CHA A:HEM201 3.4 7.0 1.0
CHC A:HEM201 3.4 5.9 1.0
CHB A:HEM201 3.4 6.2 1.0
ND1 A:HIS93 4.2 7.6 1.0
CG A:HIS93 4.3 6.1 1.0
C3D A:HEM201 4.3 7.7 1.0
C2D A:HEM201 4.3 7.4 1.0
C3C A:HEM201 4.3 6.6 1.0
C2A A:HEM201 4.3 6.8 1.0
C2C A:HEM201 4.3 6.4 1.0
C3A A:HEM201 4.3 6.4 1.0
C3B A:HEM201 4.3 6.4 1.0
C2B A:HEM201 4.3 6.2 1.0
NE2 A:HIS64 4.5 8.8 1.0
CG2 A:VAL68 4.7 7.5 1.0
CE1 A:HIS64 4.9 9.8 1.0
C6 A:IPH202 5.0 8.5 0.6

Reference:

X.Huang, C.Wang, L.R.Celeste, L.L.Lovelace, S.Sun, J.H.Dawson, L.Lebioda. Complex of Myoglobin with Phenol Bound in A Proximal Cavity. Acta Crystallogr.,Sect.F V. 68 1465 2012.
ISSN: ESSN 1744-3091
PubMed: 23192025
DOI: 10.1107/S1744309112045514
Page generated: Mon Aug 5 03:05:16 2024

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