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Iron in PDB 4l6g: Crystal Structure of P450CIN Y81F Mutant, Crystallized in 7 Mm 1,8- Cineole

Protein crystallography data

The structure of Crystal Structure of P450CIN Y81F Mutant, Crystallized in 7 Mm 1,8- Cineole, PDB code: 4l6g was solved by Y.Madrona, T.L.Poulos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.75 / 1.37
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 68.810, 103.770, 127.710, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 20.7

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of P450CIN Y81F Mutant, Crystallized in 7 Mm 1,8- Cineole (pdb code 4l6g). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of P450CIN Y81F Mutant, Crystallized in 7 Mm 1,8- Cineole, PDB code: 4l6g:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 4l6g

Go back to Iron Binding Sites List in 4l6g
Iron binding site 1 out of 2 in the Crystal Structure of P450CIN Y81F Mutant, Crystallized in 7 Mm 1,8- Cineole


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of P450CIN Y81F Mutant, Crystallized in 7 Mm 1,8- Cineole within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:12.0
occ:1.00
FE A:HEM501 0.0 12.0 1.0
NA A:HEM501 2.0 10.6 1.0
NC A:HEM501 2.1 11.7 1.0
ND A:HEM501 2.1 13.0 1.0
NB A:HEM501 2.1 10.8 1.0
SG A:CYS347 2.5 12.4 1.0
C1D A:HEM501 3.1 13.2 1.0
C4C A:HEM501 3.1 11.6 1.0
C4A A:HEM501 3.1 11.0 1.0
C1B A:HEM501 3.1 10.4 1.0
C1A A:HEM501 3.1 10.4 1.0
C4B A:HEM501 3.1 13.2 1.0
C4D A:HEM501 3.1 12.6 1.0
C1C A:HEM501 3.1 14.4 1.0
CHD A:HEM501 3.4 12.7 1.0
CB A:CYS347 3.4 11.2 1.0
CHA A:HEM501 3.5 13.0 1.0
CHB A:HEM501 3.5 10.6 1.0
CHC A:HEM501 3.5 13.1 1.0
CA A:CYS347 4.0 12.7 1.0
C3A A:HEM501 4.3 9.6 1.0
C2D A:HEM501 4.3 15.3 1.0
C3C A:HEM501 4.3 13.0 1.0
C2B A:HEM501 4.3 11.6 1.0
C3B A:HEM501 4.3 12.2 1.0
C2A A:HEM501 4.3 10.7 1.0
C2C A:HEM501 4.3 15.5 1.0
C3D A:HEM501 4.3 14.5 1.0
ND2 A:ASN242 4.6 16.2 1.0
C2 A:CNL502 4.6 25.9 1.0
N A:LEU348 4.6 14.9 1.0
N A:GLY349 4.6 14.9 1.0
C A:CYS347 4.7 13.7 1.0
C7 A:CNL502 4.7 25.1 1.0

Iron binding site 2 out of 2 in 4l6g

Go back to Iron Binding Sites List in 4l6g
Iron binding site 2 out of 2 in the Crystal Structure of P450CIN Y81F Mutant, Crystallized in 7 Mm 1,8- Cineole


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of P450CIN Y81F Mutant, Crystallized in 7 Mm 1,8- Cineole within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe501

b:10.7
occ:1.00
FE B:HEM501 0.0 10.7 1.0
ND B:HEM501 2.0 11.8 1.0
NB B:HEM501 2.0 11.0 1.0
NA B:HEM501 2.0 10.2 1.0
NC B:HEM501 2.1 12.2 1.0
SG B:CYS347 2.4 11.0 1.0
C4B B:HEM501 3.0 10.6 1.0
C4D B:HEM501 3.1 10.7 1.0
C1A B:HEM501 3.1 10.1 1.0
C4A B:HEM501 3.1 9.6 1.0
C1C B:HEM501 3.1 11.9 1.0
C1D B:HEM501 3.1 11.7 1.0
C1B B:HEM501 3.1 10.6 1.0
C4C B:HEM501 3.1 11.9 1.0
CB B:CYS347 3.4 10.5 1.0
CHC B:HEM501 3.4 12.1 1.0
CHA B:HEM501 3.4 10.0 1.0
CHD B:HEM501 3.5 12.8 1.0
CHB B:HEM501 3.5 12.0 1.0
CA B:CYS347 3.9 10.3 1.0
C3B B:HEM501 4.3 10.3 1.0
C2B B:HEM501 4.3 10.6 1.0
C3D B:HEM501 4.3 11.6 1.0
C3C B:HEM501 4.3 12.4 1.0
C3A B:HEM501 4.3 10.0 1.0
C2C B:HEM501 4.3 13.3 1.0
C2D B:HEM501 4.3 13.1 1.0
C2A B:HEM501 4.3 9.0 1.0
ND2 B:ASN242 4.4 19.3 1.0
N B:LEU348 4.5 10.8 1.0
C2 B:CNL502 4.6 21.9 1.0
C B:CYS347 4.6 11.4 1.0
N B:GLY349 4.6 11.3 1.0
C7 B:CNL502 4.8 22.9 1.0

Reference:

Y.Madrona, S.A.Hollingsworth, B.Khan, T.L.Poulos. P450CIN Active Site Water: Implications For Substrate Binding and Solvent Accessibility. Biochemistry V. 52 5039 2013.
ISSN: ISSN 0006-2960
PubMed: 23829586
DOI: 10.1021/BI4006946
Page generated: Tue Aug 5 12:28:37 2025

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