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Iron in PDB 4nvi: Predicting Protein Conformational Response in Prospective Ligand Discovery.

Protein crystallography data

The structure of Predicting Protein Conformational Response in Prospective Ligand Discovery., PDB code: 4nvi was solved by M.Fischer, J.S.Fraser, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.40 / 1.51
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 50.790, 73.500, 104.160, 90.00, 90.00, 90.00
R / Rfree (%) 14.5 / 17.8

Other elements in 4nvi:

The structure of Predicting Protein Conformational Response in Prospective Ligand Discovery. also contains other interesting chemical elements:

Bromine (Br) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Predicting Protein Conformational Response in Prospective Ligand Discovery. (pdb code 4nvi). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Predicting Protein Conformational Response in Prospective Ligand Discovery., PDB code: 4nvi:

Iron binding site 1 out of 1 in 4nvi

Go back to Iron Binding Sites List in 4nvi
Iron binding site 1 out of 1 in the Predicting Protein Conformational Response in Prospective Ligand Discovery.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Predicting Protein Conformational Response in Prospective Ligand Discovery. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe301

b:13.8
occ:1.00
FE B:HEM301 0.0 13.8 1.0
NB B:HEM301 2.0 13.5 1.0
NC B:HEM301 2.0 12.2 1.0
NA B:HEM301 2.0 13.6 1.0
ND B:HEM301 2.0 12.2 1.0
O B:HOH647 2.1 35.2 1.0
NE2 B:HIS175 2.1 13.0 1.0
C1A B:HEM301 3.0 14.4 1.0
C4C B:HEM301 3.0 12.7 1.0
C1D B:HEM301 3.0 11.3 1.0
C1B B:HEM301 3.0 12.4 1.0
C4B B:HEM301 3.1 13.0 1.0
C1C B:HEM301 3.1 11.9 1.0
C4D B:HEM301 3.1 13.0 1.0
CD2 B:HIS175 3.1 12.4 1.0
C4A B:HEM301 3.1 13.7 1.0
CE1 B:HIS175 3.1 13.1 1.0
CHA B:HEM301 3.4 13.8 1.0
CHC B:HEM301 3.4 12.2 1.0
CHB B:HEM301 3.4 14.3 1.0
CHD B:HEM301 3.5 11.9 1.0
NE1 B:TRP51 4.0 15.9 1.0
O B:HOH648 4.1 23.0 0.6
NE B:ARG48 4.2 16.8 0.4
C2C B:HEM301 4.2 10.9 1.0
C2A B:HEM301 4.2 13.6 1.0
O B:HOH519 4.3 26.9 1.0
ND1 B:HIS175 4.3 13.5 1.0
C2B B:HEM301 4.3 13.1 1.0
C3B B:HEM301 4.3 13.3 1.0
C3C B:HEM301 4.3 11.8 1.0
CG B:HIS175 4.3 13.0 1.0
C2D B:HEM301 4.3 12.5 1.0
C3A B:HEM301 4.3 14.1 1.0
C3D B:HEM301 4.3 13.0 1.0
CD1 B:TRP51 4.4 16.2 1.0
CAC B:2NW302 4.7 15.3 0.8
NH1 B:ARG48 4.8 14.1 0.4
CD B:ARG48 4.9 16.2 0.4
CZ B:ARG48 5.0 16.4 0.4

Reference:

M.Fischer, R.G.Coleman, J.S.Fraser, B.K.Shoichet. Predicting Protein Conformational Response in Prospective Ligand Discovery To Be Published.
Page generated: Mon Aug 5 08:02:24 2024

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