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Iron in PDB 4r85: Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine
Enzymatic activity of Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine
All present enzymatic activity of Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine:
3.5.4.1;
3.5.4.1;
Protein crystallography data
The structure of Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine, PDB code: 4r85
was solved by
A.A.Fedorov,
E.V.Fedorov,
D.S.Hitchcock,
F.M.Raushel,
S.C.Almo,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 40.17 / 1.80 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 111.481, 137.669, 112.093, 90.00, 118.03, 90.00 |
| R / Rfree (%) | 15.9 / 18.7 |
Iron Binding Sites:
The binding sites of Iron atom in the Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine
(pdb code 4r85). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 6 binding sites of Iron where determined in the Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine, PDB code: 4r85:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Iron where determined in the Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine, PDB code: 4r85:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6;
Iron binding site 1 out of 6 in 4r85
Go back to
Iron Binding Sites List in 4r85
Iron binding site 1 out
of 6 in the Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine within 5.0Å range:
|
Iron binding site 2 out of 6 in 4r85
Go back to
Iron Binding Sites List in 4r85
Iron binding site 2 out
of 6 in the Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine within 5.0Å range:
|
Iron binding site 3 out of 6 in 4r85
Go back to
Iron Binding Sites List in 4r85
Iron binding site 3 out
of 6 in the Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine within 5.0Å range:
|
Iron binding site 4 out of 6 in 4r85
Go back to
Iron Binding Sites List in 4r85
Iron binding site 4 out
of 6 in the Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine within 5.0Å range:
|
Iron binding site 5 out of 6 in 4r85
Go back to
Iron Binding Sites List in 4r85
Iron binding site 5 out
of 6 in the Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine within 5.0Å range:
|
Iron binding site 6 out of 6 in 4r85
Go back to
Iron Binding Sites List in 4r85
Iron binding site 6 out
of 6 in the Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine within 5.0Å range:
|
Reference:
A.A.Fedorov,
E.V.Fedorov,
D.S.Hitchcock,
F.M.Raushel,
S.C.Almo.
Crystal Structure of 5-Methylcytosine Deaminase From Klebsiella Pneumoniae Liganded with 5-Methylcytosine To Be Published.
Page generated: Mon Aug 5 09:09:59 2024
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