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Iron in PDB 4wgy: Crystal Structure of Cytochrome C' From Alcaligenes Xylosoxidans Ncimb 11015 at pH 10.4

Protein crystallography data

The structure of Crystal Structure of Cytochrome C' From Alcaligenes Xylosoxidans Ncimb 11015 at pH 10.4, PDB code: 4wgy was solved by A.Takashina, M.Unno, T.Kohzuma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.61 / 1.48
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 52.666, 52.666, 183.584, 90.00, 90.00, 120.00
R / Rfree (%) 13.8 / 17.3

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Cytochrome C' From Alcaligenes Xylosoxidans Ncimb 11015 at pH 10.4 (pdb code 4wgy). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Cytochrome C' From Alcaligenes Xylosoxidans Ncimb 11015 at pH 10.4, PDB code: 4wgy:

Iron binding site 1 out of 1 in 4wgy

Go back to Iron Binding Sites List in 4wgy
Iron binding site 1 out of 1 in the Crystal Structure of Cytochrome C' From Alcaligenes Xylosoxidans Ncimb 11015 at pH 10.4


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Cytochrome C' From Alcaligenes Xylosoxidans Ncimb 11015 at pH 10.4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:8.4
occ:1.00
FE A:HEC201 0.0 8.4 1.0
NA A:HEC201 2.0 8.0 1.0
ND A:HEC201 2.0 8.1 1.0
NC A:HEC201 2.0 7.4 1.0
NB A:HEC201 2.1 8.3 1.0
NE2 A:HIS120 2.2 8.1 1.0
C4D A:HEC201 3.0 7.8 1.0
C1B A:HEC201 3.0 8.9 1.0
C1D A:HEC201 3.1 7.8 1.0
C4B A:HEC201 3.1 7.7 1.0
C4A A:HEC201 3.1 7.0 1.0
C4C A:HEC201 3.1 8.0 1.0
C1C A:HEC201 3.1 7.3 1.0
C1A A:HEC201 3.1 8.5 1.0
CD2 A:HIS120 3.1 8.5 1.0
CE1 A:HIS120 3.2 10.7 1.0
CHD A:HEC201 3.4 8.3 1.0
CHB A:HEC201 3.4 8.1 1.0
CHA A:HEC201 3.5 7.1 1.0
CHC A:HEC201 3.5 8.2 1.0
CD2 A:LEU16 3.6 9.5 1.0
ND1 A:HIS120 4.3 11.1 1.0
CG A:HIS120 4.3 9.4 1.0
C3B A:HEC201 4.3 8.1 1.0
C3D A:HEC201 4.3 8.0 1.0
C3C A:HEC201 4.3 8.4 1.0
C2C A:HEC201 4.3 7.4 1.0
C3A A:HEC201 4.3 8.9 1.0
C2B A:HEC201 4.3 9.9 1.0
C2D A:HEC201 4.4 8.5 1.0
C2A A:HEC201 4.4 8.3 1.0
CD1 A:LEU16 4.4 8.3 1.0
CG A:LEU16 4.5 8.1 1.0
NH2 A:ARG124 4.5 13.9 1.0
CB A:LEU16 4.7 7.7 1.0
CD A:ARG124 4.9 11.4 1.0

Reference:

A.Takashina, M.Unno, T.Kohzuma. X-Ray Crystallographic Elucidation For the Alkaline High-Spin State Transition of Iron(III) Cytochrome C' From Alcaligenes Xylosoxidans Ncimb 11015 Chem Lett. V. 44 268 2015.
DOI: 10.1246/CL.140975
Page generated: Mon Aug 5 14:22:18 2024

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