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Iron in PDB 4xdi: Structure of Chlamydomonas Reinhardtii THB1

Protein crystallography data

The structure of Structure of Chlamydomonas Reinhardtii THB1, PDB code: 4xdi was solved by S.L.Rice, L.E.Boucher, J.L.Schlessman, J.Bosch, J.T.J.Lecomte, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.30 / 1.89
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 144.513, 144.513, 79.913, 90.00, 90.00, 120.00
R / Rfree (%) 18.7 / 21.8

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Chlamydomonas Reinhardtii THB1 (pdb code 4xdi). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure of Chlamydomonas Reinhardtii THB1, PDB code: 4xdi:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 4xdi

Go back to Iron Binding Sites List in 4xdi
Iron binding site 1 out of 2 in the Structure of Chlamydomonas Reinhardtii THB1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Chlamydomonas Reinhardtii THB1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:34.9
occ:1.00
FE A:HEM201 0.0 34.9 1.0
NC A:HEM201 2.0 27.6 1.0
NA A:HEM201 2.0 30.6 1.0
NB A:HEM201 2.0 33.0 1.0
ND A:HEM201 2.1 35.9 1.0
NE2 A:HIS77 2.1 35.9 1.0
NZ A:LYS53 2.2 31.8 1.0
C1C A:HEM201 3.0 34.6 1.0
C4C A:HEM201 3.0 32.6 1.0
C1D A:HEM201 3.0 32.3 1.0
C4B A:HEM201 3.0 32.4 1.0
C4A A:HEM201 3.0 32.7 1.0
C1A A:HEM201 3.1 35.0 1.0
C4D A:HEM201 3.1 37.1 1.0
CE1 A:HIS77 3.1 34.2 1.0
C1B A:HEM201 3.1 32.7 1.0
CD2 A:HIS77 3.1 34.5 1.0
CE A:LYS53 3.2 32.9 1.0
CHD A:HEM201 3.4 34.4 1.0
CHC A:HEM201 3.4 29.7 1.0
CHA A:HEM201 3.4 33.3 1.0
CHB A:HEM201 3.4 31.9 1.0
CD A:LYS53 3.8 35.4 1.0
ND1 A:HIS77 4.2 35.2 1.0
C2C A:HEM201 4.2 30.8 1.0
C3C A:HEM201 4.2 30.4 1.0
CG A:HIS77 4.2 34.5 1.0
C3A A:HEM201 4.2 37.2 1.0
C2A A:HEM201 4.3 35.3 1.0
C3B A:HEM201 4.3 30.4 1.0
C2D A:HEM201 4.3 33.4 1.0
C3D A:HEM201 4.3 33.7 1.0
C2B A:HEM201 4.3 35.5 1.0
CG A:LYS53 4.4 34.8 1.0
CZ A:PHE57 5.0 36.0 1.0

Iron binding site 2 out of 2 in 4xdi

Go back to Iron Binding Sites List in 4xdi
Iron binding site 2 out of 2 in the Structure of Chlamydomonas Reinhardtii THB1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Chlamydomonas Reinhardtii THB1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:41.1
occ:1.00
FE B:HEM201 0.0 41.1 1.0
NC B:HEM201 2.0 33.9 1.0
NA B:HEM201 2.0 39.7 1.0
ND B:HEM201 2.1 45.5 1.0
NB B:HEM201 2.1 34.2 1.0
NE2 B:HIS77 2.2 41.0 1.0
NZ B:LYS53 2.2 37.2 1.0
C1C B:HEM201 3.0 40.5 1.0
C1A B:HEM201 3.1 44.3 1.0
C4C B:HEM201 3.1 37.4 1.0
C4B B:HEM201 3.1 37.2 1.0
C1D B:HEM201 3.1 43.9 1.0
C4D B:HEM201 3.1 41.3 1.0
C4A B:HEM201 3.1 43.6 1.0
C1B B:HEM201 3.1 38.9 1.0
CD2 B:HIS77 3.1 40.3 1.0
CE1 B:HIS77 3.1 39.9 1.0
CE B:LYS53 3.2 37.4 1.0
CHC B:HEM201 3.4 32.8 1.0
CHD B:HEM201 3.4 42.3 1.0
CHA B:HEM201 3.4 40.5 1.0
CHB B:HEM201 3.5 42.0 1.0
CD B:LYS53 3.9 41.4 1.0
C2C B:HEM201 4.2 36.6 1.0
ND1 B:HIS77 4.2 40.9 1.0
C3C B:HEM201 4.3 37.3 1.0
C2A B:HEM201 4.3 45.8 1.0
CG B:HIS77 4.3 41.5 1.0
C3A B:HEM201 4.3 44.2 1.0
C2D B:HEM201 4.3 45.7 1.0
C3B B:HEM201 4.3 36.2 1.0
C3D B:HEM201 4.3 45.3 1.0
C2B B:HEM201 4.3 37.9 1.0
CG B:LYS53 4.4 41.9 1.0
CZ B:PHE57 4.9 50.3 1.0

Reference:

S.L.Rice, L.E.Boucher, J.L.Schlessman, J.Bosch, J.T.J.Lecomte. Structure of Chlamydomonas Reinhardtii THB1 To Be Published.
Page generated: Mon Aug 5 15:27:25 2024

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