Atomistry » Iron » PDB 4x3s-4xq1 » 4xdi
Atomistry »
  Iron »
    PDB 4x3s-4xq1 »
      4xdi »

Iron in PDB 4xdi: Structure of Chlamydomonas Reinhardtii THB1

Protein crystallography data

The structure of Structure of Chlamydomonas Reinhardtii THB1, PDB code: 4xdi was solved by S.L.Rice, L.E.Boucher, J.L.Schlessman, J.Bosch, J.T.J.Lecomte, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.30 / 1.89
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 144.513, 144.513, 79.913, 90.00, 90.00, 120.00
R / Rfree (%) 18.7 / 21.8

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Chlamydomonas Reinhardtii THB1 (pdb code 4xdi). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure of Chlamydomonas Reinhardtii THB1, PDB code: 4xdi:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 4xdi

Go back to Iron Binding Sites List in 4xdi
Iron binding site 1 out of 2 in the Structure of Chlamydomonas Reinhardtii THB1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Chlamydomonas Reinhardtii THB1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:34.9
occ:1.00
FE A:HEM201 0.0 34.9 1.0
NC A:HEM201 2.0 27.6 1.0
NA A:HEM201 2.0 30.6 1.0
NB A:HEM201 2.0 33.0 1.0
ND A:HEM201 2.1 35.9 1.0
NE2 A:HIS77 2.1 35.9 1.0
NZ A:LYS53 2.2 31.8 1.0
C1C A:HEM201 3.0 34.6 1.0
C4C A:HEM201 3.0 32.6 1.0
C1D A:HEM201 3.0 32.3 1.0
C4B A:HEM201 3.0 32.4 1.0
C4A A:HEM201 3.0 32.7 1.0
C1A A:HEM201 3.1 35.0 1.0
C4D A:HEM201 3.1 37.1 1.0
CE1 A:HIS77 3.1 34.2 1.0
C1B A:HEM201 3.1 32.7 1.0
CD2 A:HIS77 3.1 34.5 1.0
CE A:LYS53 3.2 32.9 1.0
CHD A:HEM201 3.4 34.4 1.0
CHC A:HEM201 3.4 29.7 1.0
CHA A:HEM201 3.4 33.3 1.0
CHB A:HEM201 3.4 31.9 1.0
CD A:LYS53 3.8 35.4 1.0
ND1 A:HIS77 4.2 35.2 1.0
C2C A:HEM201 4.2 30.8 1.0
C3C A:HEM201 4.2 30.4 1.0
CG A:HIS77 4.2 34.5 1.0
C3A A:HEM201 4.2 37.2 1.0
C2A A:HEM201 4.3 35.3 1.0
C3B A:HEM201 4.3 30.4 1.0
C2D A:HEM201 4.3 33.4 1.0
C3D A:HEM201 4.3 33.7 1.0
C2B A:HEM201 4.3 35.5 1.0
CG A:LYS53 4.4 34.8 1.0
CZ A:PHE57 5.0 36.0 1.0

Iron binding site 2 out of 2 in 4xdi

Go back to Iron Binding Sites List in 4xdi
Iron binding site 2 out of 2 in the Structure of Chlamydomonas Reinhardtii THB1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Chlamydomonas Reinhardtii THB1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:41.1
occ:1.00
FE B:HEM201 0.0 41.1 1.0
NC B:HEM201 2.0 33.9 1.0
NA B:HEM201 2.0 39.7 1.0
ND B:HEM201 2.1 45.5 1.0
NB B:HEM201 2.1 34.2 1.0
NE2 B:HIS77 2.2 41.0 1.0
NZ B:LYS53 2.2 37.2 1.0
C1C B:HEM201 3.0 40.5 1.0
C1A B:HEM201 3.1 44.3 1.0
C4C B:HEM201 3.1 37.4 1.0
C4B B:HEM201 3.1 37.2 1.0
C1D B:HEM201 3.1 43.9 1.0
C4D B:HEM201 3.1 41.3 1.0
C4A B:HEM201 3.1 43.6 1.0
C1B B:HEM201 3.1 38.9 1.0
CD2 B:HIS77 3.1 40.3 1.0
CE1 B:HIS77 3.1 39.9 1.0
CE B:LYS53 3.2 37.4 1.0
CHC B:HEM201 3.4 32.8 1.0
CHD B:HEM201 3.4 42.3 1.0
CHA B:HEM201 3.4 40.5 1.0
CHB B:HEM201 3.5 42.0 1.0
CD B:LYS53 3.9 41.4 1.0
C2C B:HEM201 4.2 36.6 1.0
ND1 B:HIS77 4.2 40.9 1.0
C3C B:HEM201 4.3 37.3 1.0
C2A B:HEM201 4.3 45.8 1.0
CG B:HIS77 4.3 41.5 1.0
C3A B:HEM201 4.3 44.2 1.0
C2D B:HEM201 4.3 45.7 1.0
C3B B:HEM201 4.3 36.2 1.0
C3D B:HEM201 4.3 45.3 1.0
C2B B:HEM201 4.3 37.9 1.0
CG B:LYS53 4.4 41.9 1.0
CZ B:PHE57 4.9 50.3 1.0

Reference:

S.L.Rice, L.E.Boucher, J.L.Schlessman, J.Bosch, J.T.J.Lecomte. Structure of Chlamydomonas Reinhardtii THB1 To Be Published.
Page generated: Tue Aug 5 17:04:02 2025

Last articles

Mg in 4YOU
Mg in 4YOY
Mg in 4YOT
Mg in 4YOR
Mg in 4YN8
Mg in 4YOK
Mg in 4YNQ
Mg in 4YO7
Mg in 4YN0
Mg in 4YMU
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy