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Iron in PDB 5a5v: A Complex of the Synthetic Siderophore Analogue Fe(III)-6-Licam with the Ceue Periplasmic Protein From Campylobacter Jejuni

Protein crystallography data

The structure of A Complex of the Synthetic Siderophore Analogue Fe(III)-6-Licam with the Ceue Periplasmic Protein From Campylobacter Jejuni, PDB code: 5a5v was solved by E.Blagova, A.Hughes, O.V.Moroz, D.J.Raines, E.J.Wilde, J.P.Turkenburg, A.-K.Duhme-Klair, K.S.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.97 / 2.04
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 61.370, 66.080, 68.960, 90.00, 90.00, 90.00
R / Rfree (%) 21.3 / 26.5

Iron Binding Sites:

The binding sites of Iron atom in the A Complex of the Synthetic Siderophore Analogue Fe(III)-6-Licam with the Ceue Periplasmic Protein From Campylobacter Jejuni (pdb code 5a5v). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the A Complex of the Synthetic Siderophore Analogue Fe(III)-6-Licam with the Ceue Periplasmic Protein From Campylobacter Jejuni, PDB code: 5a5v:

Iron binding site 1 out of 1 in 5a5v

Go back to Iron Binding Sites List in 5a5v
Iron binding site 1 out of 1 in the A Complex of the Synthetic Siderophore Analogue Fe(III)-6-Licam with the Ceue Periplasmic Protein From Campylobacter Jejuni


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of A Complex of the Synthetic Siderophore Analogue Fe(III)-6-Licam with the Ceue Periplasmic Protein From Campylobacter Jejuni within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe400

b:15.3
occ:1.00
O27 A:PXJ500 1.9 16.9 1.0
OH A:TYR288 1.9 16.1 1.0
O29 A:PXJ500 2.0 15.8 1.0
O28 A:PXJ500 2.1 15.7 1.0
O26 A:PXJ500 2.1 16.6 1.0
NE2 A:HIS227 2.3 18.2 1.0
C22 A:PXJ500 2.8 17.2 1.0
C2 A:PXJ500 2.8 17.9 1.0
C21 A:PXJ500 2.9 16.5 1.0
C3 A:PXJ500 2.9 17.9 1.0
CZ A:TYR288 3.1 17.1 1.0
CD2 A:HIS227 3.2 17.5 1.0
CE1 A:HIS227 3.3 17.3 1.0
CE2 A:TYR288 3.8 17.8 1.0
CE1 A:TYR288 3.9 18.4 1.0
NH2 A:ARG249 4.0 19.5 1.0
OE1 A:GLN98 4.1 26.1 1.0
NE A:ARG118 4.1 18.0 1.0
NH2 A:ARG118 4.1 17.4 1.0
C1 A:PXJ500 4.2 18.8 1.0
C23 A:PXJ500 4.2 18.1 1.0
NH1 A:ARG205 4.2 17.1 1.0
NE A:ARG249 4.2 19.1 1.0
C20 A:PXJ500 4.3 17.5 1.0
C4 A:PXJ500 4.3 19.3 1.0
CG A:HIS227 4.4 16.7 1.0
ND1 A:HIS227 4.4 17.5 1.0
CZ A:ARG118 4.6 16.7 1.0
CZ A:ARG249 4.6 19.4 1.0
NH2 A:ARG205 4.6 16.7 1.0
N10 A:PXJ500 4.6 22.2 1.0
N17 A:PXJ500 4.7 20.4 1.0
CZ A:ARG205 4.9 17.1 1.0

Reference:

E.J.Wilde, A.Hughes, E.V.Blagova, O.V.Moroz, R.P.Thomas, J.P.Turkenburg, D.J.Raines, A.K.Duhme-Klair, K.S.Wilson. Interactions of the Periplasmic Binding Protein Ceue with Fe(III) N-Licam(4-) Siderophore Analogues of Varied Linker Length. Sci Rep V. 7 45941 2017.
ISSN: ESSN 2045-2322
PubMed: 28383577
DOI: 10.1038/SREP45941
Page generated: Mon Aug 5 18:48:32 2024

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