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Iron in PDB 5cje: Structure of CYP107L2

Protein crystallography data

The structure of Structure of CYP107L2, PDB code: 5cje was solved by T.-V.Pham, S.-H.Han, J.-H.Kim, D.-H.Kim, L.-W.Kang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.87 / 2.50
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 110.184, 50.585, 74.638, 90.00, 98.91, 90.00
R / Rfree (%) 17 / 25.5

Iron Binding Sites:

The binding sites of Iron atom in the Structure of CYP107L2 (pdb code 5cje). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of CYP107L2, PDB code: 5cje:

Iron binding site 1 out of 1 in 5cje

Go back to Iron Binding Sites List in 5cje
Iron binding site 1 out of 1 in the Structure of CYP107L2


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of CYP107L2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe402

b:25.3
occ:1.00
FE A:HEM402 0.0 25.3 1.0
ND A:HEM402 1.9 26.9 1.0
NA A:HEM402 2.0 27.9 1.0
NC A:HEM402 2.1 27.6 1.0
NB A:HEM402 2.1 27.8 1.0
SG A:CYS344 2.2 25.6 1.0
C1D A:HEM402 2.9 27.7 1.0
C4D A:HEM402 2.9 27.4 1.0
O A:HOH560 2.9 21.4 1.0
C4B A:HEM402 3.0 28.4 1.0
C1A A:HEM402 3.0 27.1 1.0
C4A A:HEM402 3.0 29.0 1.0
C1B A:HEM402 3.1 28.8 1.0
C4C A:HEM402 3.1 29.1 1.0
C1C A:HEM402 3.1 28.6 1.0
CB A:CYS344 3.4 27.1 1.0
CHD A:HEM402 3.4 27.1 1.0
CHA A:HEM402 3.4 27.9 1.0
CHC A:HEM402 3.4 28.0 1.0
CHB A:HEM402 3.5 30.3 1.0
CA A:CYS344 4.1 29.4 1.0
C3D A:HEM402 4.1 29.2 1.0
C2D A:HEM402 4.1 28.0 1.0
C3A A:HEM402 4.2 27.9 1.0
C2A A:HEM402 4.3 27.6 1.0
C3C A:HEM402 4.3 29.6 1.0
C2C A:HEM402 4.3 28.0 1.0
C2B A:HEM402 4.3 28.0 1.0
C3B A:HEM402 4.3 29.2 1.0
N A:GLY346 4.6 25.0 1.0
CB A:ALA233 4.6 46.5 1.0
N A:LEU345 4.7 31.5 1.0
C A:CYS344 4.8 29.6 1.0

Reference:

T.-V.Pham, S.-H.Han, J.-H.Kim, D.-H.Kim, L.-W.Kang. Structure of CYP107L2 To Be Published.
Page generated: Mon Aug 5 21:06:44 2024

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