Atomistry » Iron » PDB 5cne-5da5 » 5cnf
Atomistry »
  Iron »
    PDB 5cne-5da5 »
      5cnf »

Iron in PDB 5cnf: Ultrafast Dynamics in Myoglobin: 50 Ps Time Delay

Protein crystallography data

The structure of Ultrafast Dynamics in Myoglobin: 50 Ps Time Delay, PDB code: 5cnf was solved by T.R.M.Barends, L.Foucar, A.Ardevol, K.J.Nass, A.Aquila, S.Botha, R.B.Doak, K.Falahati, E.Hartmann, M.Hilpert, M.Heinz, M.C.Hoffmann, J.Koefinger, J.Koglin, G.Kovacsova, M.Liang, D.Milathianaki, H.T.Lemke, J.Reinstein, C.M.Roome, R.L.Shoeman, G.J.Williams, I.Burghardt, G.Hummer, S.Boutet, I.Schlichting, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.71 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.600, 28.800, 35.600, 90.00, 106.50, 90.00
R / Rfree (%) 16.6 / 21.8

Iron Binding Sites:

The binding sites of Iron atom in the Ultrafast Dynamics in Myoglobin: 50 Ps Time Delay (pdb code 5cnf). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Ultrafast Dynamics in Myoglobin: 50 Ps Time Delay, PDB code: 5cnf:

Iron binding site 1 out of 1 in 5cnf

Go back to Iron Binding Sites List in 5cnf
Iron binding site 1 out of 1 in the Ultrafast Dynamics in Myoglobin: 50 Ps Time Delay


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Ultrafast Dynamics in Myoglobin: 50 Ps Time Delay within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:28.9
occ:1.00
FE A:HEM201 0.0 28.9 1.0
NA A:HEM201 2.1 23.0 1.0
NB A:HEM201 2.1 24.5 1.0
NC A:HEM201 2.1 23.8 1.0
ND A:HEM201 2.1 25.7 1.0
NE2 A:HIS93 2.2 25.1 1.0
C1A A:HEM201 3.1 26.8 1.0
C4A A:HEM201 3.1 23.7 1.0
C4C A:HEM201 3.1 22.7 1.0
C4D A:HEM201 3.1 27.5 1.0
C4B A:HEM201 3.1 27.1 1.0
C1C A:HEM201 3.1 21.5 1.0
C1D A:HEM201 3.1 26.5 1.0
C1B A:HEM201 3.1 23.7 1.0
CD2 A:HIS93 3.2 24.0 1.0
CE1 A:HIS93 3.2 25.8 1.0
CHA A:HEM201 3.4 25.2 1.0
CHD A:HEM201 3.4 26.9 1.0
CHB A:HEM201 3.5 23.4 1.0
CHC A:HEM201 3.5 24.0 1.0
C A:CMO204 3.6 32.8 1.0
C2A A:HEM201 4.3 25.0 1.0
C3A A:HEM201 4.3 25.6 1.0
C3B A:HEM201 4.3 24.8 1.0
C2C A:HEM201 4.3 25.1 1.0
C2B A:HEM201 4.3 24.4 1.0
C3D A:HEM201 4.3 27.1 1.0
C3C A:HEM201 4.3 21.1 1.0
ND1 A:HIS93 4.3 25.9 1.0
C2D A:HEM201 4.3 27.9 1.0
CG A:HIS93 4.4 26.1 1.0
O A:CMO204 4.4 33.0 1.0
NE2 A:HIS64 4.6 30.0 1.0
CG2 A:VAL68 4.6 26.9 1.0

Reference:

T.R.Barends, L.Foucar, A.Ardevol, K.Nass, A.Aquila, S.Botha, R.B.Doak, K.Falahati, E.Hartmann, M.Hilpert, M.Heinz, M.C.Hoffmann, J.Kofinger, J.E.Koglin, G.Kovacsova, M.Liang, D.Milathianaki, H.T.Lemke, J.Reinstein, C.M.Roome, R.L.Shoeman, G.J.Williams, I.Burghardt, G.Hummer, S.Boutet, I.Schlichting. Direct Observation of Ultrafast Collective Motions in Co Myoglobin Upon Ligand Dissociation. Science V. 350 445 2015.
ISSN: ESSN 1095-9203
PubMed: 26359336
DOI: 10.1126/SCIENCE.AAC5492
Page generated: Mon Aug 5 21:34:11 2024

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy