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Iron in PDB 5f8p: A Novel Inhibitor of the Obesity-Related Protein Fto

Protein crystallography data

The structure of A Novel Inhibitor of the Obesity-Related Protein Fto, PDB code: 5f8p was solved by J.Chai, B.Zhou, W.Liu, Z.Han, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.87 / 2.20
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 142.218, 142.218, 83.028, 90.00, 90.00, 120.00
R / Rfree (%) 18.8 / 23.4

Other elements in 5f8p:

The structure of A Novel Inhibitor of the Obesity-Related Protein Fto also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the A Novel Inhibitor of the Obesity-Related Protein Fto (pdb code 5f8p). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the A Novel Inhibitor of the Obesity-Related Protein Fto, PDB code: 5f8p:

Iron binding site 1 out of 1 in 5f8p

Go back to Iron Binding Sites List in 5f8p
Iron binding site 1 out of 1 in the A Novel Inhibitor of the Obesity-Related Protein Fto


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of A Novel Inhibitor of the Obesity-Related Protein Fto within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe604

b:90.4
occ:1.00
O5 A:AKG603 2.6 79.0 1.0
NE2 A:HIS307 2.6 37.0 1.0
C2 A:AKG603 2.7 77.8 1.0
OD1 A:ASP233 2.8 45.4 1.0
O A:HOH704 2.8 63.2 1.0
NE2 A:HIS231 3.0 44.1 1.0
C3 A:AKG603 3.0 67.9 1.0
C4 A:AKG603 3.3 57.8 1.0
O1 A:AKG603 3.5 78.6 1.0
CD2 A:HIS307 3.5 40.5 1.0
CE1 A:HIS231 3.6 43.1 1.0
CE1 A:HIS307 3.6 41.9 1.0
C1 A:AKG603 3.6 76.7 1.0
CG A:ASP233 3.6 45.2 1.0
OD2 A:ASP233 3.7 48.0 1.0
CD2 A:HIS231 4.2 45.2 1.0
NH2 A:ARG322 4.3 51.8 1.0
CG A:HIS307 4.7 43.0 1.0
ND1 A:HIS307 4.7 39.5 1.0
ND1 A:HIS231 4.8 49.1 1.0
C5 A:AKG603 4.8 54.0 1.0
O2 A:AKG603 4.9 68.9 1.0

Reference:

J.Chai, B.Zhou, W.Liu, Z.Han. Crystal Structure of Fto-Chtb To Be Published.
Page generated: Tue Aug 5 21:25:59 2025

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