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Iron in PDB 5jrd: E. Coli Hydrogenase-1 Variant P508A
Enzymatic activity of E. Coli Hydrogenase-1 Variant P508A
All present enzymatic activity of E. Coli Hydrogenase-1 Variant P508A:
1.12.99.6;
1.12.99.6;
Protein crystallography data
The structure of E. Coli Hydrogenase-1 Variant P508A, PDB code: 5jrd
was solved by
S.B.Carr,
S.E.V.Phillips,
F.A.Armstrong,
R.M.Evans,
E.J.Brooke,
S.T.A.Islam,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 92.69 / 1.20 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 94.691, 98.589, 185.373, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 12.1 / 14.1 |
Other elements in 5jrd:
The structure of E. Coli Hydrogenase-1 Variant P508A also contains other interesting chemical elements:
| Nickel | (Ni) | 2 atoms |
| Magnesium | (Mg) | 2 atoms |
| Chlorine | (Cl) | 4 atoms |
Iron Binding Sites:
Pages:
>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 26;Binding sites:
The binding sites of Iron atom in the E. Coli Hydrogenase-1 Variant P508A (pdb code 5jrd). This binding sites where shown within 5.0 Angstroms radius around Iron atom.In total 26 binding sites of Iron where determined in the E. Coli Hydrogenase-1 Variant P508A, PDB code: 5jrd:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;
Iron binding site 1 out of 26 in 5jrd
Go back to
Iron Binding Sites List in 5jrd
Iron binding site 1 out
of 26 in the E. Coli Hydrogenase-1 Variant P508A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of E. Coli Hydrogenase-1 Variant P508A within 5.0Å range:
|
Iron binding site 2 out of 26 in 5jrd
Go back to
Iron Binding Sites List in 5jrd
Iron binding site 2 out
of 26 in the E. Coli Hydrogenase-1 Variant P508A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of E. Coli Hydrogenase-1 Variant P508A within 5.0Å range:
|
Iron binding site 3 out of 26 in 5jrd
Go back to
Iron Binding Sites List in 5jrd
Iron binding site 3 out
of 26 in the E. Coli Hydrogenase-1 Variant P508A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of E. Coli Hydrogenase-1 Variant P508A within 5.0Å range:
|
Iron binding site 4 out of 26 in 5jrd
Go back to
Iron Binding Sites List in 5jrd
Iron binding site 4 out
of 26 in the E. Coli Hydrogenase-1 Variant P508A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of E. Coli Hydrogenase-1 Variant P508A within 5.0Å range:
|
Iron binding site 5 out of 26 in 5jrd
Go back to
Iron Binding Sites List in 5jrd
Iron binding site 5 out
of 26 in the E. Coli Hydrogenase-1 Variant P508A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 5 of E. Coli Hydrogenase-1 Variant P508A within 5.0Å range:
|
Iron binding site 6 out of 26 in 5jrd
Go back to
Iron Binding Sites List in 5jrd
Iron binding site 6 out
of 26 in the E. Coli Hydrogenase-1 Variant P508A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 6 of E. Coli Hydrogenase-1 Variant P508A within 5.0Å range:
|
Iron binding site 7 out of 26 in 5jrd
Go back to
Iron Binding Sites List in 5jrd
Iron binding site 7 out
of 26 in the E. Coli Hydrogenase-1 Variant P508A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 7 of E. Coli Hydrogenase-1 Variant P508A within 5.0Å range:
|
Iron binding site 8 out of 26 in 5jrd
Go back to
Iron Binding Sites List in 5jrd
Iron binding site 8 out
of 26 in the E. Coli Hydrogenase-1 Variant P508A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 8 of E. Coli Hydrogenase-1 Variant P508A within 5.0Å range:
|
Iron binding site 9 out of 26 in 5jrd
Go back to
Iron Binding Sites List in 5jrd
Iron binding site 9 out
of 26 in the E. Coli Hydrogenase-1 Variant P508A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 9 of E. Coli Hydrogenase-1 Variant P508A within 5.0Å range:
|
Iron binding site 10 out of 26 in 5jrd
Go back to
Iron Binding Sites List in 5jrd
Iron binding site 10 out
of 26 in the E. Coli Hydrogenase-1 Variant P508A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 10 of E. Coli Hydrogenase-1 Variant P508A within 5.0Å range:
|
Reference:
E.J.Brooke,
R.M.Evans,
S.T.Islam,
G.M.Roberts,
S.A.Wehlin,
S.B.Carr,
S.E.Phillips,
F.A.Armstrong.
Importance of the Active Site "Canopy" Residues in An O2-Tolerant [Nife]-Hydrogenase. Biochemistry V. 56 132 2017.
ISSN: ISSN 1520-4995
PubMed: 28001048
DOI: 10.1021/ACS.BIOCHEM.6B00868
Page generated: Tue Aug 5 22:14:24 2025
ISSN: ISSN 1520-4995
PubMed: 28001048
DOI: 10.1021/ACS.BIOCHEM.6B00868
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