Atomistry » Iron » PDB 5ym3-5zm4 » 5ym3
Atomistry »
  Iron »
    PDB 5ym3-5zm4 »
      5ym3 »

Iron in PDB 5ym3: CYP76AH1-4PI From Salvia Miltiorrhiza

Enzymatic activity of CYP76AH1-4PI From Salvia Miltiorrhiza

All present enzymatic activity of CYP76AH1-4PI From Salvia Miltiorrhiza:
1.14.13.190;

Protein crystallography data

The structure of CYP76AH1-4PI From Salvia Miltiorrhiza, PDB code: 5ym3 was solved by Z.Chang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.13 / 2.60
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 109.103, 109.103, 105.709, 90.00, 90.00, 120.00
R / Rfree (%) 18.5 / 23.1

Other elements in 5ym3:

The structure of CYP76AH1-4PI From Salvia Miltiorrhiza also contains other interesting chemical elements:

Manganese (Mn) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the CYP76AH1-4PI From Salvia Miltiorrhiza (pdb code 5ym3). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the CYP76AH1-4PI From Salvia Miltiorrhiza, PDB code: 5ym3:

Iron binding site 1 out of 1 in 5ym3

Go back to Iron Binding Sites List in 5ym3
Iron binding site 1 out of 1 in the CYP76AH1-4PI From Salvia Miltiorrhiza


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of CYP76AH1-4PI From Salvia Miltiorrhiza within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:32.6
occ:1.00
FE A:HEM501 0.0 32.6 1.0
ND A:HEM501 2.0 33.0 1.0
NC A:HEM501 2.1 37.5 1.0
NA A:HEM501 2.1 35.9 1.0
NB A:HEM501 2.1 36.8 1.0
SG A:CYS437 2.6 34.2 1.0
C4C A:HEM501 3.0 37.7 1.0
C1D A:HEM501 3.0 38.4 1.0
C4A A:HEM501 3.1 30.6 1.0
C1B A:HEM501 3.1 35.1 1.0
C4D A:HEM501 3.1 32.2 1.0
C1A A:HEM501 3.1 37.3 1.0
O A:HOH676 3.1 35.1 1.0
C1C A:HEM501 3.1 38.1 1.0
C4B A:HEM501 3.2 37.2 1.0
CHD A:HEM501 3.3 35.9 1.0
CHB A:HEM501 3.5 32.4 1.0
CHA A:HEM501 3.5 32.4 1.0
CB A:CYS437 3.5 32.8 1.0
CHC A:HEM501 3.5 36.8 1.0
C3C A:HEM501 4.2 37.1 1.0
C2D A:HEM501 4.3 36.9 1.0
C2C A:HEM501 4.3 37.4 1.0
C3A A:HEM501 4.3 34.2 1.0
C3D A:HEM501 4.3 33.9 1.0
C2A A:HEM501 4.3 36.6 1.0
C2B A:HEM501 4.3 33.2 1.0
C3B A:HEM501 4.4 35.6 1.0
CA A:CYS437 4.4 34.0 1.0
O A:GLY298 4.5 41.5 1.0
N3 A:PIM502 4.9 53.7 1.0
CD A:PRO438 5.0 35.2 1.0

Reference:

Z.Chang, Z.Chang. N/A N/A.
Page generated: Tue Aug 6 12:59:19 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy