Atomistry » Iron » PDB 6cdk-6cxu » 6cfq
Atomistry »
  Iron »
    PDB 6cdk-6cxu »
      6cfq »

Iron in PDB 6cfq: Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound

Enzymatic activity of Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound

All present enzymatic activity of Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound:
1.11.1.21;

Protein crystallography data

The structure of Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound, PDB code: 6cfq was solved by P.C.Loewen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 96.32 / 1.72
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 100.641, 115.506, 174.546, 90.00, 90.00, 90.00
R / Rfree (%) 14.1 / 17

Other elements in 6cfq:

The structure of Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Sodium (Na) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound (pdb code 6cfq). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound, PDB code: 6cfq:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 6cfq

Go back to Iron Binding Sites List in 6cfq
Iron binding site 1 out of 2 in the Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe801

b:17.7
occ:1.00
FE A:HEM801 0.0 17.7 1.0
ND A:HEM801 1.9 17.5 1.0
NE2 A:HIS279 2.0 17.6 1.0
NA A:HEM801 2.0 19.6 1.0
NB A:HEM801 2.0 18.2 1.0
NC A:HEM801 2.1 15.2 1.0
O A:HOH906 2.5 31.7 1.0
C4D A:HEM801 3.0 15.8 1.0
CE1 A:HIS279 3.0 19.1 1.0
C1A A:HEM801 3.0 17.0 1.0
C1D A:HEM801 3.0 15.9 1.0
C1B A:HEM801 3.0 19.8 1.0
C4A A:HEM801 3.0 21.0 1.0
C4B A:HEM801 3.0 18.0 1.0
CD2 A:HIS279 3.0 16.5 1.0
C4C A:HEM801 3.1 15.6 1.0
C1C A:HEM801 3.1 16.4 1.0
CHA A:HEM801 3.4 17.7 1.0
CHB A:HEM801 3.4 20.1 1.0
CHC A:HEM801 3.4 16.9 1.0
CHD A:HEM801 3.5 15.6 1.0
O1 A:OXY808 4.1 43.6 1.0
ND1 A:HIS279 4.1 18.5 1.0
CG A:HIS279 4.2 16.2 1.0
C2A A:HEM801 4.2 20.4 1.0
C3A A:HEM801 4.2 20.6 1.0
C3D A:HEM801 4.2 16.7 1.0
C2B A:HEM801 4.3 20.6 1.0
C2D A:HEM801 4.3 15.6 1.0
C3C A:HEM801 4.3 15.6 1.0
C2C A:HEM801 4.3 15.7 1.0
C3B A:HEM801 4.3 18.4 1.0
NE1 A:TRP111 4.4 18.6 1.0
O1 A:OXY804 4.5 37.6 1.0
CD1 A:TRP111 4.6 18.9 1.0
O2 A:OXY808 4.8 35.2 1.0

Iron binding site 2 out of 2 in 6cfq

Go back to Iron Binding Sites List in 6cfq
Iron binding site 2 out of 2 in the Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of the D141N Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe801

b:17.1
occ:1.00
FE B:HEM801 0.0 17.1 1.0
ND B:HEM801 2.0 16.3 1.0
NA B:HEM801 2.0 17.1 1.0
NE2 B:HIS279 2.0 17.0 1.0
NC B:HEM801 2.0 15.1 1.0
NB B:HEM801 2.1 16.8 1.0
O B:HOH910 2.4 33.6 1.0
C4D B:HEM801 3.0 16.0 1.0
C1A B:HEM801 3.0 16.6 1.0
C1D B:HEM801 3.0 15.1 1.0
CE1 B:HIS279 3.0 16.1 1.0
CD2 B:HIS279 3.0 16.8 1.0
C4A B:HEM801 3.0 17.7 1.0
C1B B:HEM801 3.0 18.9 1.0
C4C B:HEM801 3.0 14.9 1.0
C4B B:HEM801 3.1 16.9 1.0
C1C B:HEM801 3.1 15.4 1.0
CHA B:HEM801 3.4 16.5 1.0
CHB B:HEM801 3.4 16.3 1.0
CHD B:HEM801 3.4 15.0 1.0
CHC B:HEM801 3.5 15.9 1.0
O1 B:OXY807 4.0 41.0 1.0
ND1 B:HIS279 4.2 17.1 1.0
CG B:HIS279 4.2 17.1 1.0
C3D B:HEM801 4.2 16.4 1.0
C2A B:HEM801 4.2 16.9 1.0
C3A B:HEM801 4.2 16.7 1.0
C2D B:HEM801 4.2 15.4 1.0
C3C B:HEM801 4.2 15.0 1.0
C2B B:HEM801 4.3 17.4 1.0
C2C B:HEM801 4.3 15.7 1.0
C3B B:HEM801 4.3 17.1 1.0
NE1 B:TRP111 4.4 17.6 1.0
O2 B:OXY807 4.5 39.3 1.0
CD1 B:TRP111 4.6 18.6 1.0
O1 B:OXY804 4.6 32.4 1.0

Reference:

P.C.Loewen, P.C.Loewen. N/A N/A.
Page generated: Wed Aug 6 04:24:03 2025

Last articles

Mn in 9LJU
Mn in 9LJW
Mn in 9LJS
Mn in 9LJR
Mn in 9LJT
Mn in 9LJV
Mg in 9UA2
Mg in 9R96
Mg in 9VM1
Mg in 9P01
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy