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Iron in PDB 6de9: Mitoneet Bound to Furosemide

Protein crystallography data

The structure of Mitoneet Bound to Furosemide, PDB code: 6de9 was solved by A.R.Robart, W.J.Geldenhuys, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.30 / 1.95
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 58.830, 58.830, 176.750, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 22.1

Other elements in 6de9:

The structure of Mitoneet Bound to Furosemide also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Mitoneet Bound to Furosemide (pdb code 6de9). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Mitoneet Bound to Furosemide, PDB code: 6de9:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 6de9

Go back to Iron Binding Sites List in 6de9
Iron binding site 1 out of 2 in the Mitoneet Bound to Furosemide


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Mitoneet Bound to Furosemide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:42.4
occ:1.00
FE1 A:FES201 0.0 42.4 1.0
S1 A:FES201 2.2 36.4 1.0
S2 A:FES201 2.2 32.4 1.0
SG A:CYS74 2.4 33.0 1.0
SG A:CYS72 2.4 28.4 1.0
FE2 A:FES201 2.7 43.7 1.0
CB A:CYS72 3.4 33.4 1.0
CB A:CYS74 3.4 30.3 1.0
N A:CYS74 3.6 28.4 1.0
CA A:CYS72 3.7 30.9 1.0
N A:ARG73 4.0 31.3 1.0
CA A:CYS74 4.0 28.8 1.0
CB A:HIS87 4.1 34.8 1.0
N A:HIS87 4.2 34.3 1.0
C A:CYS72 4.3 33.5 1.0
ND1 A:HIS87 4.4 40.6 1.0
N A:TRP75 4.4 29.0 1.0
CB A:SER77 4.4 35.2 1.0
C A:CYS74 4.5 28.7 1.0
N A:SER77 4.5 33.2 1.0
CA A:HIS87 4.5 33.0 1.0
N A:ARG76 4.7 30.8 1.0
C A:ARG73 4.7 26.8 1.0
CG A:HIS87 4.7 40.0 1.0
CA A:CYS83 4.8 37.6 1.0
SG A:CYS83 4.8 37.6 1.0
CB A:CYS83 4.8 37.8 1.0
CA A:ARG73 5.0 27.0 1.0
CA A:SER77 5.0 38.4 1.0

Iron binding site 2 out of 2 in 6de9

Go back to Iron Binding Sites List in 6de9
Iron binding site 2 out of 2 in the Mitoneet Bound to Furosemide


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Mitoneet Bound to Furosemide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:43.7
occ:1.00
FE2 A:FES201 0.0 43.7 1.0
S2 A:FES201 2.2 32.4 1.0
S1 A:FES201 2.2 36.4 1.0
ND1 A:HIS87 2.3 40.6 1.0
SG A:CYS83 2.4 37.6 1.0
FE1 A:FES201 2.7 42.4 1.0
CE1 A:HIS87 3.2 43.5 1.0
CB A:CYS83 3.3 37.8 1.0
CG A:HIS87 3.3 40.0 1.0
CB A:HIS87 3.6 34.8 1.0
CA A:CYS83 3.9 37.6 1.0
N A:GLY85 4.0 38.8 1.0
N A:HIS87 4.0 34.3 1.0
CD A:PRO100 4.2 27.3 1.0
CB A:PRO100 4.2 31.8 1.0
N A:ASP84 4.2 37.2 1.0
NE2 A:HIS87 4.3 42.6 1.0
CG A:PRO100 4.3 41.5 1.0
CD2 A:HIS87 4.3 41.5 1.0
CA A:GLY85 4.4 36.6 1.0
CA A:HIS87 4.4 33.0 1.0
C A:CYS83 4.4 39.2 1.0
SG A:CYS74 4.5 33.0 1.0
N A:ALA86 4.5 38.9 1.0
CA A:CYS72 4.6 30.9 1.0
C A:GLY85 4.6 41.3 1.0
SG A:CYS72 4.7 28.4 1.0
N A:PRO100 4.7 34.2 1.0
CB A:CYS72 4.8 33.4 1.0
CA A:PRO100 4.9 31.5 1.0

Reference:

W.J.Geldenhuys, T.Iwasaki, R.A.A.Nunez, R.R.Nair, M.E.Konkle, M.A.Menze, T.E.Long. Mitoneet Bound to Furosemide To Be Published.
Page generated: Tue Aug 6 16:25:33 2024

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