Atomistry » Iron » PDB 6fmo-6g5t » 6fsl
Atomistry »
  Iron »
    PDB 6fmo-6g5t »
      6fsl »

Iron in PDB 6fsl: F194W Mutant of the Dye-Decolorizing Peroxidase (Dyp) From Pleurotus Ostreatus

Protein crystallography data

The structure of F194W Mutant of the Dye-Decolorizing Peroxidase (Dyp) From Pleurotus Ostreatus, PDB code: 6fsl was solved by A.Romero, I.Davo-Siguero, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 88.35 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 61.869, 118.140, 133.078, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 24.3

Iron Binding Sites:

The binding sites of Iron atom in the F194W Mutant of the Dye-Decolorizing Peroxidase (Dyp) From Pleurotus Ostreatus (pdb code 6fsl). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the F194W Mutant of the Dye-Decolorizing Peroxidase (Dyp) From Pleurotus Ostreatus, PDB code: 6fsl:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 6fsl

Go back to Iron Binding Sites List in 6fsl
Iron binding site 1 out of 2 in the F194W Mutant of the Dye-Decolorizing Peroxidase (Dyp) From Pleurotus Ostreatus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of F194W Mutant of the Dye-Decolorizing Peroxidase (Dyp) From Pleurotus Ostreatus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:10.7
occ:1.00
FE A:HEM501 0.0 10.7 1.0
ND A:HEM501 1.9 10.8 1.0
NA A:HEM501 2.0 10.9 1.0
NC A:HEM501 2.1 10.8 1.0
NB A:HEM501 2.1 10.7 1.0
NE2 A:HIS334 2.2 10.4 1.0
C1D A:HEM501 2.9 10.6 1.0
C4D A:HEM501 2.9 10.7 1.0
C4A A:HEM501 3.0 11.0 1.0
C1A A:HEM501 3.0 11.3 1.0
C1B A:HEM501 3.0 10.8 1.0
C4C A:HEM501 3.0 10.7 1.0
C4B A:HEM501 3.1 10.7 1.0
CE1 A:HIS334 3.1 10.6 1.0
C1C A:HEM501 3.1 10.8 1.0
CD2 A:HIS334 3.3 10.7 1.0
CHD A:HEM501 3.4 10.4 1.0
CHA A:HEM501 3.4 11.0 1.0
O A:HOH676 3.4 22.8 1.0
CHB A:HEM501 3.4 10.8 1.0
CHC A:HEM501 3.5 10.6 1.0
C3D A:HEM501 4.2 10.5 1.0
C2D A:HEM501 4.2 10.9 1.0
C3A A:HEM501 4.2 11.6 1.0
C2A A:HEM501 4.3 11.1 1.0
ND1 A:HIS334 4.3 10.9 1.0
NH1 A:ARG360 4.3 15.2 1.0
C3C A:HEM501 4.3 10.7 1.0
C2B A:HEM501 4.3 10.7 1.0
C2C A:HEM501 4.3 10.7 1.0
C3B A:HEM501 4.3 11.1 1.0
CG A:HIS334 4.4 10.8 1.0
CD A:ARG360 4.8 15.5 1.0
CZ A:ARG360 4.9 15.5 1.0

Iron binding site 2 out of 2 in 6fsl

Go back to Iron Binding Sites List in 6fsl
Iron binding site 2 out of 2 in the F194W Mutant of the Dye-Decolorizing Peroxidase (Dyp) From Pleurotus Ostreatus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of F194W Mutant of the Dye-Decolorizing Peroxidase (Dyp) From Pleurotus Ostreatus within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe501

b:13.1
occ:1.00
FE B:HEM501 0.0 13.1 1.0
ND B:HEM501 1.9 13.4 1.0
NA B:HEM501 2.0 13.1 1.0
NB B:HEM501 2.1 13.3 1.0
NC B:HEM501 2.1 13.4 1.0
NE2 B:HIS334 2.4 15.8 1.0
C1D B:HEM501 2.9 13.8 1.0
C4D B:HEM501 2.9 13.7 1.0
C4A B:HEM501 3.0 13.4 1.0
C1B B:HEM501 3.0 13.5 1.0
C1A B:HEM501 3.0 13.5 1.0
C4B B:HEM501 3.0 13.5 1.0
O B:HOH664 3.0 21.5 1.0
C4C B:HEM501 3.1 13.9 1.0
C1C B:HEM501 3.1 13.8 1.0
CD2 B:HIS334 3.3 15.6 1.0
CE1 B:HIS334 3.3 15.6 1.0
CHB B:HEM501 3.4 13.9 1.0
CHD B:HEM501 3.4 14.2 1.0
CHA B:HEM501 3.4 13.8 1.0
CHC B:HEM501 3.4 13.7 1.0
C3A B:HEM501 4.2 13.5 1.0
C3D B:HEM501 4.2 14.4 1.0
C2D B:HEM501 4.2 14.4 1.0
C2A B:HEM501 4.2 13.5 1.0
C2B B:HEM501 4.2 13.6 1.0
C3C B:HEM501 4.3 14.5 1.0
C2C B:HEM501 4.3 14.2 1.0
C3B B:HEM501 4.3 13.5 1.0
ND1 B:HIS334 4.4 15.6 1.0
CG B:HIS334 4.5 15.5 1.0
NH1 B:ARG360 4.5 15.2 1.0
CD B:ARG360 4.7 13.7 1.0

Reference:

A.Romero, I.Davo-Siguero, A.T.Martinez. Structure of Two Mutants: F194Y and F194W of the Dye-Decolorizing Peroxidase Dyp From Pleurotus Ostreatus To Be Published.
Page generated: Tue Aug 6 18:39:45 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy