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Iron in PDB 6hcy: Human STEAP4 Bound to Nadp, Fad, Heme and Fe(III)-Nta.

Iron Binding Sites:

The binding sites of Iron atom in the Human STEAP4 Bound to Nadp, Fad, Heme and Fe(III)-Nta. (pdb code 6hcy). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 3 binding sites of Iron where determined in the Human STEAP4 Bound to Nadp, Fad, Heme and Fe(III)-Nta., PDB code: 6hcy:
Jump to Iron binding site number: 1; 2; 3;

Iron binding site 1 out of 3 in 6hcy

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Iron binding site 1 out of 3 in the Human STEAP4 Bound to Nadp, Fad, Heme and Fe(III)-Nta.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Human STEAP4 Bound to Nadp, Fad, Heme and Fe(III)-Nta. within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe502

b:64.6
occ:1.00
FE C:HEM502 0.0 64.6 1.0
ND C:HEM502 1.9 64.6 1.0
NA C:HEM502 2.0 64.6 1.0
NE2 C:HIS397 2.0 64.0 1.0
NE2 C:HIS304 2.0 59.2 1.0
NC C:HEM502 2.1 64.6 1.0
NB C:HEM502 2.1 64.6 1.0
C4D C:HEM502 2.8 64.6 1.0
CD2 C:HIS397 2.9 64.0 1.0
C1D C:HEM502 2.9 64.6 1.0
C1A C:HEM502 2.9 64.6 1.0
CD2 C:HIS304 3.0 59.2 1.0
C4A C:HEM502 3.0 64.6 1.0
C4C C:HEM502 3.0 64.6 1.0
CE1 C:HIS304 3.0 59.2 1.0
C1B C:HEM502 3.1 64.6 1.0
C4B C:HEM502 3.1 64.6 1.0
CE1 C:HIS397 3.1 64.0 1.0
C1C C:HEM502 3.1 64.6 1.0
CHA C:HEM502 3.3 64.6 1.0
CHD C:HEM502 3.4 64.6 1.0
CHB C:HEM502 3.5 64.6 1.0
CHC C:HEM502 3.5 64.6 1.0
CG C:HIS397 4.1 64.0 1.0
C3D C:HEM502 4.1 64.6 1.0
C2D C:HEM502 4.1 64.6 1.0
CG C:HIS304 4.1 59.2 1.0
C2A C:HEM502 4.1 64.6 1.0
ND1 C:HIS304 4.1 59.2 1.0
ND1 C:HIS397 4.1 64.0 1.0
C3A C:HEM502 4.2 64.6 1.0
C3C C:HEM502 4.2 64.6 1.0
C2C C:HEM502 4.3 64.6 1.0
C2B C:HEM502 4.3 64.6 1.0
C3B C:HEM502 4.3 64.6 1.0
CB C:PRO248 4.9 62.7 1.0

Iron binding site 2 out of 3 in 6hcy

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Iron binding site 2 out of 3 in the Human STEAP4 Bound to Nadp, Fad, Heme and Fe(III)-Nta.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Human STEAP4 Bound to Nadp, Fad, Heme and Fe(III)-Nta. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe502

b:64.3
occ:1.00
FE A:HEM502 0.0 64.3 1.0
ND A:HEM502 1.9 64.3 1.0
NA A:HEM502 2.0 64.3 1.0
NE2 A:HIS397 2.0 63.3 1.0
NE2 A:HIS304 2.0 59.4 1.0
NC A:HEM502 2.1 64.3 1.0
NB A:HEM502 2.1 64.3 1.0
C4D A:HEM502 2.8 64.3 1.0
CD2 A:HIS397 2.9 63.3 1.0
C1D A:HEM502 2.9 64.3 1.0
C1A A:HEM502 2.9 64.3 1.0
CD2 A:HIS304 3.0 59.4 1.0
C4A A:HEM502 3.0 64.3 1.0
C4C A:HEM502 3.0 64.3 1.0
CE1 A:HIS304 3.0 59.4 1.0
C1B A:HEM502 3.1 64.3 1.0
C4B A:HEM502 3.1 64.3 1.0
CE1 A:HIS397 3.1 63.3 1.0
C1C A:HEM502 3.1 64.3 1.0
CHA A:HEM502 3.3 64.3 1.0
CHD A:HEM502 3.4 64.3 1.0
CHB A:HEM502 3.5 64.3 1.0
CHC A:HEM502 3.5 64.3 1.0
CG A:HIS397 4.1 63.3 1.0
C3D A:HEM502 4.1 64.3 1.0
C2D A:HEM502 4.1 64.3 1.0
CG A:HIS304 4.1 59.4 1.0
C2A A:HEM502 4.1 64.3 1.0
ND1 A:HIS304 4.1 59.4 1.0
ND1 A:HIS397 4.1 63.3 1.0
C3A A:HEM502 4.2 64.3 1.0
C3C A:HEM502 4.2 64.3 1.0
C2C A:HEM502 4.3 64.3 1.0
C2B A:HEM502 4.3 64.3 1.0
C3B A:HEM502 4.3 64.3 1.0
CB A:PRO248 4.9 62.3 1.0

Iron binding site 3 out of 3 in 6hcy

Go back to Iron Binding Sites List in 6hcy
Iron binding site 3 out of 3 in the Human STEAP4 Bound to Nadp, Fad, Heme and Fe(III)-Nta.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Human STEAP4 Bound to Nadp, Fad, Heme and Fe(III)-Nta. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe502

b:63.7
occ:1.00
FE B:HEM502 0.0 63.7 1.0
ND B:HEM502 1.9 63.7 1.0
NA B:HEM502 2.0 63.7 1.0
NE2 B:HIS397 2.0 63.0 1.0
NE2 B:HIS304 2.0 59.0 1.0
NC B:HEM502 2.1 63.7 1.0
NB B:HEM502 2.1 63.7 1.0
C4D B:HEM502 2.8 63.7 1.0
CD2 B:HIS397 2.9 63.0 1.0
C1D B:HEM502 2.9 63.7 1.0
C1A B:HEM502 2.9 63.7 1.0
CD2 B:HIS304 3.0 59.0 1.0
C4A B:HEM502 3.0 63.7 1.0
C4C B:HEM502 3.0 63.7 1.0
CE1 B:HIS304 3.0 59.0 1.0
C1B B:HEM502 3.1 63.7 1.0
C4B B:HEM502 3.1 63.7 1.0
CE1 B:HIS397 3.1 63.0 1.0
C1C B:HEM502 3.1 63.7 1.0
CHA B:HEM502 3.3 63.7 1.0
CHD B:HEM502 3.4 63.7 1.0
CHB B:HEM502 3.5 63.7 1.0
CHC B:HEM502 3.5 63.7 1.0
CG B:HIS397 4.1 63.0 1.0
C3D B:HEM502 4.1 63.7 1.0
C2D B:HEM502 4.1 63.7 1.0
CG B:HIS304 4.1 59.0 1.0
C2A B:HEM502 4.1 63.7 1.0
ND1 B:HIS304 4.1 59.0 1.0
ND1 B:HIS397 4.1 63.0 1.0
C3A B:HEM502 4.2 63.7 1.0
C3C B:HEM502 4.2 63.7 1.0
C2C B:HEM502 4.3 63.7 1.0
C2B B:HEM502 4.3 63.7 1.0
C3B B:HEM502 4.3 63.7 1.0
CB B:PRO248 4.9 61.6 1.0

Reference:

W.Oosterheert, L.S.Van Bezouwen, R.N.P.Rodenburg, J.Granneman, F.Forster, A.Mattevi, P.Gros. Cryo-Em Structures of Human STEAP4 Reveal Mechanism of Iron(III) Reduction. Nat Commun V. 9 4337 2018.
ISSN: ESSN 2041-1723
PubMed: 30337524
DOI: 10.1038/S41467-018-06817-7
Page generated: Tue Aug 6 21:22:45 2024

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