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Iron in PDB 6hqm: Crystal Structure of Gcoa F169I Bound to Guaiacol

Protein crystallography data

The structure of Crystal Structure of Gcoa F169I Bound to Guaiacol, PDB code: 6hqm was solved by S.J.B.Mallinson, D.J.Hinchen, M.D.Allen, C.W.Johnson, G.T.Beckham, J.E.Mcgeehan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.61 / 1.85
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 105.210, 105.210, 112.545, 90.00, 90.00, 90.00
R / Rfree (%) 16.1 / 18

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Gcoa F169I Bound to Guaiacol (pdb code 6hqm). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Gcoa F169I Bound to Guaiacol, PDB code: 6hqm:

Iron binding site 1 out of 1 in 6hqm

Go back to Iron Binding Sites List in 6hqm
Iron binding site 1 out of 1 in the Crystal Structure of Gcoa F169I Bound to Guaiacol


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Gcoa F169I Bound to Guaiacol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:19.7
occ:1.00
FE A:HEM501 0.0 19.7 1.0
NC A:HEM501 2.1 20.1 1.0
NB A:HEM501 2.1 18.5 1.0
ND A:HEM501 2.1 16.8 1.0
NA A:HEM501 2.1 17.6 1.0
SG A:CYS356 2.4 20.6 1.0
C4B A:HEM501 3.1 17.5 1.0
C1C A:HEM501 3.1 21.4 1.0
C1B A:HEM501 3.1 19.3 1.0
C1D A:HEM501 3.1 18.5 1.0
C4C A:HEM501 3.1 19.3 1.0
C4D A:HEM501 3.1 16.5 1.0
C4A A:HEM501 3.1 17.5 1.0
C1A A:HEM501 3.1 17.8 1.0
CB A:CYS356 3.3 17.8 1.0
CHC A:HEM501 3.4 20.6 1.0
CHD A:HEM501 3.4 19.2 1.0
CHB A:HEM501 3.5 18.2 1.0
CHA A:HEM501 3.5 18.4 1.0
CA A:CYS356 3.9 20.0 1.0
CAA A:JZ3502 3.9 20.6 1.0
C3B A:HEM501 4.3 17.5 1.0
C2B A:HEM501 4.3 17.8 1.0
C2C A:HEM501 4.3 19.3 1.0
C3C A:HEM501 4.3 15.3 1.0
C2D A:HEM501 4.3 20.1 1.0
C3D A:HEM501 4.3 16.6 1.0
C2A A:HEM501 4.3 17.7 1.0
C3A A:HEM501 4.3 18.8 1.0
N A:ALA357 4.7 17.3 1.0
C A:CYS356 4.7 17.9 1.0
N A:GLY358 4.7 21.2 1.0
CD1 A:ILE292 4.9 19.8 1.0
CAF A:JZ3502 5.0 19.3 1.0

Reference:

M.M.Machovina, S.J.B.Mallinson, B.C.Knott, A.W.Meyers, M.Garcia-Borras, L.Bu, J.E.Gado, A.Oliver, G.P.Schmidt, D.J.Hinchen, M.F.Crowley, C.W.Johnson, E.L.Neidle, C.M.Payne, K.N.Houk, G.T.Beckham, J.E.Mcgeehan, J.L.Dubois. Enabling Microbial Syringol Conversion Through Structure-Guided Protein Engineering. Proc.Natl.Acad.Sci.Usa V. 116 13970 2019.
ISSN: ESSN 1091-6490
PubMed: 31235604
DOI: 10.1073/PNAS.1820001116
Page generated: Tue Aug 6 21:39:40 2024

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