Iron in PDB 6saq: Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh
Protein crystallography data
The structure of Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh, PDB code: 6saq
was solved by
S.Gerhardt,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
29.22 /
2.02
|
|
Space group
|
P 1 21 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
95.976,
63.794,
121.398,
90.00,
105.65,
90.00
|
|
R / Rfree (%)
|
15.9 /
18.1
|
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Iron atom in the Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh
(pdb code 6saq). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the
Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh, PDB code: 6saq:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 12 in 6saq
Go back to
Iron Binding Sites List in 6saq
Iron binding site 1 out
of 12 in the Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe1001
b:22.1
occ:1.00
|
FE1
|
A:FES1001
|
0.0
|
22.1
|
1.0
|
|
S2
|
A:FES1001
|
2.2
|
22.1
|
1.0
|
|
S1
|
A:FES1001
|
2.2
|
20.6
|
1.0
|
|
SG
|
A:CYS91
|
2.3
|
22.3
|
1.0
|
|
SG
|
A:CYS86
|
2.4
|
24.4
|
1.0
|
|
FE2
|
A:FES1001
|
2.7
|
20.7
|
1.0
|
|
CB
|
A:CYS91
|
3.3
|
20.0
|
1.0
|
|
CB
|
A:CYS86
|
3.3
|
21.1
|
1.0
|
|
N
|
A:CYS91
|
3.9
|
21.1
|
1.0
|
|
CA
|
A:CYS91
|
4.2
|
20.6
|
1.0
|
|
CA
|
A:CYS127
|
4.3
|
21.0
|
1.0
|
|
N
|
A:LEU128
|
4.3
|
18.9
|
1.0
|
|
SG
|
A:CYS127
|
4.5
|
22.4
|
1.0
|
|
CB
|
A:CYS127
|
4.7
|
20.1
|
1.0
|
|
CA
|
A:CYS86
|
4.7
|
21.9
|
1.0
|
|
SG
|
A:CYS131
|
4.7
|
23.1
|
1.0
|
|
CB
|
A:SER88
|
4.7
|
28.2
|
1.0
|
|
CB
|
A:VAL136
|
4.8
|
21.9
|
1.0
|
|
CG2
|
A:VAL136
|
4.8
|
20.8
|
1.0
|
|
CA
|
A:CYS131
|
4.9
|
19.6
|
1.0
|
|
C
|
A:CYS127
|
4.9
|
23.8
|
1.0
|
|
C
|
A:VAL90
|
4.9
|
25.2
|
1.0
|
|
O
|
A:SER88
|
5.0
|
24.6
|
1.0
|
|
N
|
A:SER88
|
5.0
|
25.0
|
1.0
|
|
CB
|
A:VAL90
|
5.0
|
24.2
|
1.0
|
|
C
|
A:CYS86
|
5.0
|
23.5
|
1.0
|
|
Iron binding site 2 out
of 12 in 6saq
Go back to
Iron Binding Sites List in 6saq
Iron binding site 2 out
of 12 in the Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe1001
b:20.7
occ:1.00
|
FE2
|
A:FES1001
|
0.0
|
20.7
|
1.0
|
|
S1
|
A:FES1001
|
2.2
|
20.6
|
1.0
|
|
S2
|
A:FES1001
|
2.2
|
22.1
|
1.0
|
|
SG
|
A:CYS131
|
2.3
|
23.1
|
1.0
|
|
SG
|
A:CYS127
|
2.3
|
22.4
|
1.0
|
|
FE1
|
A:FES1001
|
2.7
|
22.1
|
1.0
|
|
CB
|
A:CYS127
|
3.4
|
20.1
|
1.0
|
|
CB
|
A:CYS131
|
3.4
|
19.4
|
1.0
|
|
CA
|
A:CYS127
|
3.8
|
21.0
|
1.0
|
|
CA
|
A:CYS131
|
3.8
|
19.6
|
1.0
|
|
N
|
A:CYS131
|
3.9
|
18.8
|
1.0
|
|
N
|
A:LEU128
|
3.9
|
18.9
|
1.0
|
|
N
|
A:GLY129
|
4.0
|
21.5
|
1.0
|
|
N
|
B:GLY99
|
4.2
|
22.2
|
1.0
|
|
C
|
A:CYS127
|
4.2
|
23.8
|
1.0
|
|
N
|
A:ALA130
|
4.3
|
20.4
|
1.0
|
|
SG
|
A:CYS86
|
4.4
|
24.4
|
1.0
|
|
CA
|
A:GLY129
|
4.6
|
21.4
|
1.0
|
|
SG
|
A:CYS91
|
4.6
|
22.3
|
1.0
|
|
CB
|
A:VAL90
|
4.8
|
24.2
|
1.0
|
|
C
|
A:ALA130
|
4.8
|
22.6
|
1.0
|
|
CG2
|
A:VAL90
|
4.8
|
22.3
|
1.0
|
|
CA
|
B:GLY99
|
4.8
|
21.9
|
1.0
|
|
C
|
A:LEU128
|
4.9
|
23.6
|
1.0
|
|
CA
|
A:LEU128
|
4.9
|
18.7
|
1.0
|
|
C
|
A:GLY129
|
5.0
|
24.5
|
1.0
|
|
Iron binding site 3 out
of 12 in 6saq
Go back to
Iron Binding Sites List in 6saq
Iron binding site 3 out
of 12 in the Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe1002
b:25.4
occ:1.00
|
FE1
|
B:SF41002
|
0.0
|
25.4
|
1.0
|
|
SG
|
B:CYS347
|
2.2
|
25.7
|
1.0
|
|
S4
|
B:SF41002
|
2.3
|
24.0
|
1.0
|
|
S3
|
B:SF41002
|
2.3
|
24.4
|
1.0
|
|
S2
|
B:SF41002
|
2.3
|
26.3
|
1.0
|
|
FE3
|
B:SF41002
|
2.7
|
25.6
|
1.0
|
|
FE4
|
B:SF41002
|
2.8
|
26.8
|
1.0
|
|
FE2
|
B:SF41002
|
2.8
|
25.4
|
1.0
|
|
CB
|
B:CYS347
|
3.5
|
22.3
|
1.0
|
|
N
|
B:CYS347
|
3.6
|
23.8
|
1.0
|
|
S1
|
B:SF41002
|
3.9
|
25.8
|
1.0
|
|
CA
|
B:CYS347
|
3.9
|
23.4
|
1.0
|
|
N
|
B:GLY348
|
4.0
|
25.0
|
1.0
|
|
N
|
B:GLN349
|
4.1
|
24.3
|
1.0
|
|
C
|
B:CYS347
|
4.3
|
27.0
|
1.0
|
|
CB
|
B:GLN349
|
4.3
|
25.8
|
1.0
|
|
CD
|
B:PRO199
|
4.3
|
22.9
|
1.0
|
|
NE2
|
B:GLN349
|
4.5
|
26.5
|
1.0
|
|
OG1
|
B:THR346
|
4.5
|
25.5
|
1.0
|
|
CG
|
B:PRO199
|
4.7
|
25.9
|
1.0
|
|
SG
|
B:CYS350
|
4.7
|
26.9
|
1.0
|
|
SG
|
B:CYS393
|
4.8
|
28.1
|
1.0
|
|
C
|
B:THR346
|
4.8
|
25.6
|
1.0
|
|
CA
|
B:GLN349
|
4.8
|
24.9
|
1.0
|
|
SG
|
B:CYS353
|
4.9
|
23.9
|
1.0
|
|
N
|
B:CYS350
|
4.9
|
22.8
|
1.0
|
|
CG
|
B:GLN349
|
4.9
|
35.3
|
1.0
|
|
CA
|
B:GLY348
|
5.0
|
25.2
|
1.0
|
|
CG1
|
B:ILE181
|
5.0
|
22.5
|
1.0
|
|
Iron binding site 4 out
of 12 in 6saq
Go back to
Iron Binding Sites List in 6saq
Iron binding site 4 out
of 12 in the Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe1002
b:25.4
occ:1.00
|
FE2
|
B:SF41002
|
0.0
|
25.4
|
1.0
|
|
S3
|
B:SF41002
|
2.3
|
24.4
|
1.0
|
|
S1
|
B:SF41002
|
2.3
|
25.8
|
1.0
|
|
S4
|
B:SF41002
|
2.3
|
24.0
|
1.0
|
|
SG
|
B:CYS353
|
2.3
|
23.9
|
1.0
|
|
FE4
|
B:SF41002
|
2.7
|
26.8
|
1.0
|
|
FE3
|
B:SF41002
|
2.8
|
25.6
|
1.0
|
|
FE1
|
B:SF41002
|
2.8
|
25.4
|
1.0
|
|
CB
|
B:CYS353
|
3.2
|
21.4
|
1.0
|
|
OG1
|
B:THR346
|
3.6
|
25.5
|
1.0
|
|
S2
|
B:SF41002
|
3.9
|
26.3
|
1.0
|
|
N
|
B:GLY396
|
4.1
|
26.7
|
1.0
|
|
CD2
|
B:LEU395
|
4.3
|
26.6
|
1.0
|
|
CA
|
B:GLY396
|
4.3
|
26.8
|
1.0
|
|
CB
|
B:THR346
|
4.5
|
26.7
|
1.0
|
|
CA
|
B:CYS353
|
4.6
|
22.1
|
1.0
|
|
N
|
B:CYS347
|
4.6
|
23.8
|
1.0
|
|
CB
|
B:LEU395
|
4.7
|
24.1
|
1.0
|
|
CA
|
B:THR346
|
4.8
|
22.6
|
1.0
|
|
SG
|
B:CYS393
|
4.8
|
28.1
|
1.0
|
|
SG
|
B:CYS350
|
4.8
|
26.9
|
1.0
|
|
CB
|
B:CYS350
|
4.9
|
23.3
|
1.0
|
|
SG
|
B:CYS347
|
4.9
|
25.7
|
1.0
|
|
C
|
B:LEU395
|
5.0
|
28.1
|
1.0
|
|
Iron binding site 5 out
of 12 in 6saq
Go back to
Iron Binding Sites List in 6saq
Iron binding site 5 out
of 12 in the Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe1002
b:25.6
occ:1.00
|
FE3
|
B:SF41002
|
0.0
|
25.6
|
1.0
|
|
S1
|
B:SF41002
|
2.3
|
25.8
|
1.0
|
|
S2
|
B:SF41002
|
2.3
|
26.3
|
1.0
|
|
SG
|
B:CYS393
|
2.3
|
28.1
|
1.0
|
|
S4
|
B:SF41002
|
2.3
|
24.0
|
1.0
|
|
FE1
|
B:SF41002
|
2.7
|
25.4
|
1.0
|
|
FE2
|
B:SF41002
|
2.8
|
25.4
|
1.0
|
|
FE4
|
B:SF41002
|
2.8
|
26.8
|
1.0
|
|
CB
|
B:CYS393
|
3.3
|
24.7
|
1.0
|
|
N
|
B:CYS393
|
3.9
|
26.6
|
1.0
|
|
S3
|
B:SF41002
|
3.9
|
24.4
|
1.0
|
|
CA
|
B:CYS393
|
3.9
|
25.2
|
1.0
|
|
CG
|
B:PRO199
|
4.2
|
25.9
|
1.0
|
|
CB
|
B:LEU395
|
4.3
|
24.1
|
1.0
|
|
C
|
B:CYS393
|
4.3
|
27.7
|
1.0
|
|
N
|
B:GLY396
|
4.4
|
26.7
|
1.0
|
|
O
|
B:CYS393
|
4.4
|
27.2
|
1.0
|
|
CD1
|
B:ILE181
|
4.4
|
23.0
|
1.0
|
|
N
|
B:LEU395
|
4.7
|
23.1
|
1.0
|
|
SG
|
B:CYS347
|
4.7
|
25.7
|
1.0
|
|
CD
|
B:PRO199
|
4.8
|
22.9
|
1.0
|
|
CB
|
B:PRO199
|
4.8
|
22.8
|
1.0
|
|
C
|
B:ILE392
|
4.8
|
31.8
|
1.0
|
|
SG
|
B:CYS353
|
4.9
|
23.9
|
1.0
|
|
SG
|
B:CYS350
|
4.9
|
26.9
|
1.0
|
|
CA
|
B:LEU395
|
4.9
|
24.1
|
1.0
|
|
N
|
B:ILE392
|
4.9
|
28.1
|
1.0
|
|
Iron binding site 6 out
of 12 in 6saq
Go back to
Iron Binding Sites List in 6saq
Iron binding site 6 out
of 12 in the Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe1002
b:26.8
occ:1.00
|
FE4
|
B:SF41002
|
0.0
|
26.8
|
1.0
|
|
S1
|
B:SF41002
|
2.3
|
25.8
|
1.0
|
|
S2
|
B:SF41002
|
2.3
|
26.3
|
1.0
|
|
SG
|
B:CYS350
|
2.3
|
26.9
|
1.0
|
|
S3
|
B:SF41002
|
2.3
|
24.4
|
1.0
|
|
FE2
|
B:SF41002
|
2.7
|
25.4
|
1.0
|
|
FE1
|
B:SF41002
|
2.8
|
25.4
|
1.0
|
|
FE3
|
B:SF41002
|
2.8
|
25.6
|
1.0
|
|
CB
|
B:CYS350
|
3.2
|
23.3
|
1.0
|
|
N
|
B:CYS350
|
3.8
|
22.8
|
1.0
|
|
S4
|
B:SF41002
|
3.9
|
24.0
|
1.0
|
|
N
|
B:ILE392
|
4.0
|
28.1
|
1.0
|
|
CA
|
B:CYS350
|
4.1
|
23.2
|
1.0
|
|
CG1
|
B:ILE392
|
4.3
|
33.2
|
1.0
|
|
CB
|
B:GLN349
|
4.4
|
25.8
|
1.0
|
|
CB
|
B:CYS353
|
4.4
|
21.4
|
1.0
|
|
SG
|
B:CYS353
|
4.6
|
23.9
|
1.0
|
|
CA
|
B:SER391
|
4.6
|
27.4
|
1.0
|
|
SG
|
B:CYS347
|
4.6
|
25.7
|
1.0
|
|
N
|
B:CYS393
|
4.7
|
26.6
|
1.0
|
|
C
|
B:GLN349
|
4.7
|
26.1
|
1.0
|
|
N
|
B:GLN349
|
4.8
|
24.3
|
1.0
|
|
C
|
B:SER391
|
4.9
|
30.9
|
1.0
|
|
CB
|
B:SER391
|
4.9
|
30.8
|
1.0
|
|
CA
|
B:ILE392
|
4.9
|
29.1
|
1.0
|
|
CA
|
B:GLN349
|
4.9
|
24.9
|
1.0
|
|
SG
|
B:CYS393
|
5.0
|
28.1
|
1.0
|
|
Iron binding site 7 out
of 12 in 6saq
Go back to
Iron Binding Sites List in 6saq
Iron binding site 7 out
of 12 in the Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe1001
b:32.2
occ:1.00
|
FE1
|
C:FES1001
|
0.0
|
32.2
|
1.0
|
|
S1
|
C:FES1001
|
2.2
|
31.3
|
1.0
|
|
S2
|
C:FES1001
|
2.2
|
29.6
|
1.0
|
|
SG
|
C:CYS91
|
2.3
|
37.2
|
1.0
|
|
SG
|
C:CYS86
|
2.3
|
35.1
|
1.0
|
|
FE2
|
C:FES1001
|
2.7
|
30.9
|
1.0
|
|
CB
|
C:CYS91
|
3.3
|
33.8
|
1.0
|
|
CB
|
C:CYS86
|
3.3
|
31.9
|
1.0
|
|
N
|
C:CYS91
|
3.9
|
33.7
|
1.0
|
|
CA
|
C:CYS91
|
4.2
|
34.5
|
1.0
|
|
CA
|
C:CYS127
|
4.3
|
29.2
|
1.0
|
|
N
|
C:LEU128
|
4.3
|
27.0
|
1.0
|
|
SG
|
C:CYS127
|
4.6
|
33.0
|
1.0
|
|
CA
|
C:CYS86
|
4.7
|
32.5
|
1.0
|
|
CB
|
C:SER88
|
4.7
|
34.8
|
1.0
|
|
CB
|
C:CYS127
|
4.7
|
29.4
|
1.0
|
|
SG
|
C:CYS131
|
4.7
|
31.7
|
1.0
|
|
CB
|
C:VAL136
|
4.8
|
40.5
|
1.0
|
|
CG2
|
C:VAL136
|
4.8
|
40.8
|
1.0
|
|
C
|
C:CYS127
|
4.9
|
30.7
|
1.0
|
|
CA
|
C:CYS131
|
4.9
|
30.0
|
1.0
|
|
O
|
C:SER88
|
5.0
|
36.9
|
1.0
|
|
C
|
C:CYS86
|
5.0
|
36.3
|
1.0
|
|
C
|
C:VAL90
|
5.0
|
35.5
|
1.0
|
|
N
|
C:SER88
|
5.0
|
33.4
|
1.0
|
|
Iron binding site 8 out
of 12 in 6saq
Go back to
Iron Binding Sites List in 6saq
Iron binding site 8 out
of 12 in the Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe1001
b:30.9
occ:1.00
|
FE2
|
C:FES1001
|
0.0
|
30.9
|
1.0
|
|
S1
|
C:FES1001
|
2.2
|
31.3
|
1.0
|
|
S2
|
C:FES1001
|
2.2
|
29.6
|
1.0
|
|
SG
|
C:CYS131
|
2.3
|
31.7
|
1.0
|
|
SG
|
C:CYS127
|
2.4
|
33.0
|
1.0
|
|
FE1
|
C:FES1001
|
2.7
|
32.2
|
1.0
|
|
CB
|
C:CYS131
|
3.4
|
28.6
|
1.0
|
|
CB
|
C:CYS127
|
3.4
|
29.4
|
1.0
|
|
CA
|
C:CYS127
|
3.8
|
29.2
|
1.0
|
|
CA
|
C:CYS131
|
3.8
|
30.0
|
1.0
|
|
N
|
C:CYS131
|
3.9
|
30.5
|
1.0
|
|
N
|
C:LEU128
|
4.0
|
27.0
|
1.0
|
|
N
|
C:GLY129
|
4.0
|
29.8
|
1.0
|
|
N
|
D:GLY99
|
4.2
|
27.1
|
1.0
|
|
C
|
C:CYS127
|
4.2
|
30.7
|
1.0
|
|
SG
|
C:CYS86
|
4.3
|
35.1
|
1.0
|
|
N
|
C:ALA130
|
4.3
|
31.8
|
1.0
|
|
CA
|
C:GLY129
|
4.6
|
30.3
|
1.0
|
|
SG
|
C:CYS91
|
4.6
|
37.2
|
1.0
|
|
CB
|
C:VAL90
|
4.7
|
34.0
|
1.0
|
|
CA
|
D:GLY99
|
4.8
|
27.4
|
1.0
|
|
C
|
C:ALA130
|
4.8
|
35.1
|
1.0
|
|
CG2
|
C:VAL90
|
4.8
|
33.4
|
1.0
|
|
C
|
C:LEU128
|
4.9
|
31.8
|
1.0
|
|
CA
|
C:LEU128
|
5.0
|
26.9
|
1.0
|
|
Iron binding site 9 out
of 12 in 6saq
Go back to
Iron Binding Sites List in 6saq
Iron binding site 9 out
of 12 in the Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe1002
b:26.4
occ:1.00
|
FE1
|
D:SF41002
|
0.0
|
26.4
|
1.0
|
|
SG
|
D:CYS347
|
2.2
|
26.5
|
1.0
|
|
S4
|
D:SF41002
|
2.3
|
25.5
|
1.0
|
|
S3
|
D:SF41002
|
2.3
|
25.2
|
1.0
|
|
S2
|
D:SF41002
|
2.3
|
28.1
|
1.0
|
|
FE4
|
D:SF41002
|
2.7
|
26.3
|
1.0
|
|
FE3
|
D:SF41002
|
2.8
|
26.9
|
1.0
|
|
FE2
|
D:SF41002
|
2.8
|
26.4
|
1.0
|
|
CB
|
D:CYS347
|
3.4
|
23.7
|
1.0
|
|
N
|
D:CYS347
|
3.7
|
25.5
|
1.0
|
|
CA
|
D:CYS347
|
3.9
|
25.1
|
1.0
|
|
S1
|
D:SF41002
|
3.9
|
26.9
|
1.0
|
|
N
|
D:GLY348
|
4.0
|
27.5
|
1.0
|
|
N
|
D:GLN349
|
4.1
|
25.2
|
1.0
|
|
C
|
D:CYS347
|
4.2
|
29.1
|
1.0
|
|
CB
|
D:GLN349
|
4.3
|
28.4
|
1.0
|
|
CD
|
D:PRO199
|
4.3
|
24.3
|
1.0
|
|
NE2
|
D:GLN349
|
4.5
|
27.5
|
1.0
|
|
OG1
|
D:THR346
|
4.6
|
26.6
|
1.0
|
|
CG
|
D:PRO199
|
4.7
|
28.7
|
1.0
|
|
SG
|
D:CYS350
|
4.7
|
27.1
|
1.0
|
|
SG
|
D:CYS393
|
4.7
|
29.1
|
1.0
|
|
C
|
D:THR346
|
4.8
|
28.9
|
1.0
|
|
CA
|
D:GLN349
|
4.8
|
26.1
|
1.0
|
|
N
|
D:CYS350
|
4.9
|
24.1
|
1.0
|
|
SG
|
D:CYS353
|
4.9
|
27.4
|
1.0
|
|
CG
|
D:GLN349
|
4.9
|
41.7
|
1.0
|
|
CA
|
D:GLY348
|
5.0
|
27.1
|
1.0
|
|
CG1
|
D:ILE181
|
5.0
|
26.2
|
1.0
|
|
Iron binding site 10 out
of 12 in 6saq
Go back to
Iron Binding Sites List in 6saq
Iron binding site 10 out
of 12 in the Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Wild-Type Nuoef From Aquifex Aeolicus Bound to Nadh-Oh within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe1002
b:26.4
occ:1.00
|
FE2
|
D:SF41002
|
0.0
|
26.4
|
1.0
|
|
SG
|
D:CYS353
|
2.3
|
27.4
|
1.0
|
|
S4
|
D:SF41002
|
2.3
|
25.5
|
1.0
|
|
S3
|
D:SF41002
|
2.3
|
25.2
|
1.0
|
|
S1
|
D:SF41002
|
2.3
|
26.9
|
1.0
|
|
FE4
|
D:SF41002
|
2.7
|
26.3
|
1.0
|
|
FE3
|
D:SF41002
|
2.7
|
26.9
|
1.0
|
|
FE1
|
D:SF41002
|
2.8
|
26.4
|
1.0
|
|
CB
|
D:CYS353
|
3.1
|
23.8
|
1.0
|
|
OG1
|
D:THR346
|
3.7
|
26.6
|
1.0
|
|
S2
|
D:SF41002
|
3.9
|
28.1
|
1.0
|
|
N
|
D:GLY396
|
4.1
|
28.2
|
1.0
|
|
CD2
|
D:LEU395
|
4.3
|
26.7
|
1.0
|
|
CA
|
D:GLY396
|
4.3
|
26.9
|
1.0
|
|
CB
|
D:THR346
|
4.5
|
30.0
|
1.0
|
|
CA
|
D:CYS353
|
4.6
|
24.6
|
1.0
|
|
CB
|
D:LEU395
|
4.6
|
24.3
|
1.0
|
|
N
|
D:CYS347
|
4.6
|
25.5
|
1.0
|
|
SG
|
D:CYS393
|
4.7
|
29.1
|
1.0
|
|
SG
|
D:CYS350
|
4.8
|
27.1
|
1.0
|
|
CA
|
D:THR346
|
4.8
|
25.7
|
1.0
|
|
CB
|
D:CYS350
|
4.9
|
23.5
|
1.0
|
|
SG
|
D:CYS347
|
4.9
|
26.5
|
1.0
|
|
C
|
D:LEU395
|
5.0
|
29.5
|
1.0
|
|
Reference:
T.Friedrich,
S.Gerhardt.
Structure of Nadh-Oh, A Novel Specific Inhibitor of Respiratory Complex I To Be Published.
Page generated: Wed Aug 6 13:38:29 2025
|
