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Iron in PDB 6t8h: Cryo-Em Structure of the Dna-Bound Pold-Pcna Processive Complex From P. Abyssi

Enzymatic activity of Cryo-Em Structure of the Dna-Bound Pold-Pcna Processive Complex From P. Abyssi

All present enzymatic activity of Cryo-Em Structure of the Dna-Bound Pold-Pcna Processive Complex From P. Abyssi:
2.7.7.7; 3.1.11.1;

Other elements in 6t8h:

The structure of Cryo-Em Structure of the Dna-Bound Pold-Pcna Processive Complex From P. Abyssi also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Cryo-Em Structure of the Dna-Bound Pold-Pcna Processive Complex From P. Abyssi (pdb code 6t8h). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Cryo-Em Structure of the Dna-Bound Pold-Pcna Processive Complex From P. Abyssi, PDB code: 6t8h:

Iron binding site 1 out of 1 in 6t8h

Go back to Iron Binding Sites List in 6t8h
Iron binding site 1 out of 1 in the Cryo-Em Structure of the Dna-Bound Pold-Pcna Processive Complex From P. Abyssi


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of the Dna-Bound Pold-Pcna Processive Complex From P. Abyssi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe701

b:86.1
occ:1.00
NE2 A:HIS562 1.9 69.5 1.0
OD1 A:ASP360 2.0 64.3 1.0
CG A:ASP360 2.1 64.3 1.0
OD2 A:ASP360 2.4 64.3 1.0
NE2 A:HIS362 2.6 56.5 1.0
CD2 A:HIS562 2.7 69.5 1.0
OD2 A:ASP404 2.9 58.1 1.0
CE1 A:HIS562 3.0 69.5 1.0
CB A:ASP360 3.1 64.3 1.0
CA A:HIS560 3.2 66.2 1.0
CE1 A:HIS362 3.4 56.5 1.0
O A:HIS560 3.6 66.2 1.0
CD2 A:HIS362 3.6 56.5 1.0
C A:HIS560 3.6 66.2 1.0
CG A:HIS562 3.9 69.5 1.0
N A:HIS560 3.9 66.2 1.0
ND1 A:HIS562 4.0 69.5 1.0
CG A:ASP404 4.0 58.1 1.0
ND1 A:HIS560 4.0 66.2 1.0
CA A:ASP360 4.1 64.3 1.0
CB A:HIS560 4.3 66.2 1.0
CG A:HIS560 4.4 66.2 1.0
ZN A:ZN702 4.4 97.9 1.0
CB A:ASP404 4.4 58.1 1.0
CE1 A:HIS497 4.4 56.2 1.0
NE2 A:HIS497 4.5 56.2 1.0
N A:VAL561 4.5 70.7 1.0
ND1 A:HIS362 4.6 56.5 1.0
CG A:HIS362 4.7 56.5 1.0
CE1 A:HIS560 4.8 66.2 1.0
N A:ASP360 5.0 64.3 1.0

Reference:

C.Madru, P.Raia, I.Hugonneau Beaufet, M.Delarue, M.Carroni, L.Sauguet. Structure of Pcna Bound to Cpip Motif of DP2 From P. Abyssi To Be Published.
Page generated: Wed Aug 6 13:56:56 2025

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