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Iron in PDB 6z8a: Outer Membrane Foxa in Complex with Nocardamine

Protein crystallography data

The structure of Outer Membrane Foxa in Complex with Nocardamine, PDB code: 6z8a was solved by I.Josts, H.Tidow, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 82.46 / 2.95
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 95.222, 95.222, 178.651, 90.00, 90.00, 120.00
R / Rfree (%) 23.5 / 27

Iron Binding Sites:

The binding sites of Iron atom in the Outer Membrane Foxa in Complex with Nocardamine (pdb code 6z8a). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Outer Membrane Foxa in Complex with Nocardamine, PDB code: 6z8a:

Iron binding site 1 out of 1 in 6z8a

Go back to Iron Binding Sites List in 6z8a
Iron binding site 1 out of 1 in the Outer Membrane Foxa in Complex with Nocardamine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Outer Membrane Foxa in Complex with Nocardamine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe905

b:70.7
occ:1.00
OAF A:6L0904 2.1 68.6 1.0
OAD A:6L0904 2.1 51.3 1.0
OAG A:6L0904 2.1 65.4 1.0
OAI A:6L0904 2.1 56.4 1.0
OAH A:6L0904 2.2 65.6 1.0
OAE A:6L0904 2.2 55.4 1.0
NBN A:6L0904 2.2 55.2 1.0
NBP A:6L0904 2.3 63.9 1.0
CBM A:6L0904 2.4 67.1 1.0
CBK A:6L0904 2.4 52.3 1.0
NBO A:6L0904 2.8 63.2 1.0
CBL A:6L0904 2.8 59.5 1.0
CBB A:6L0904 3.1 57.0 1.0
CBD A:6L0904 3.5 64.8 1.0
CBA A:6L0904 3.8 68.4 1.0
CAY A:6L0904 3.9 54.4 1.0
CAQ A:6L0904 3.9 67.4 1.0
NE2 A:HIS374 4.0 60.5 1.0
CBC A:6L0904 4.1 63.7 1.0
CAZ A:6L0904 4.2 64.4 1.0
CAP A:6L0904 4.3 58.6 1.0
NBF A:6L0904 4.5 66.1 1.0
CAR A:6L0904 4.6 60.5 1.0
CE2 A:PHE246 4.6 59.0 1.0
CAV A:6L0904 4.7 59.7 1.0
CD2 A:HIS374 4.7 63.6 1.0
CBI A:6L0904 4.7 62.5 1.0
CAK A:6L0904 4.7 66.4 1.0
NBG A:6L0904 4.8 72.3 1.0
CAN A:6L0904 4.8 65.9 1.0
OAA A:6L0904 4.8 59.3 1.0
CAX A:6L0904 4.9 69.5 1.0
CAJ A:6L0904 4.9 61.9 1.0
CAT A:6L0904 5.0 69.5 1.0

Reference:

V.Normant, I.Josts, L.Kuhn, Q.Perraud, S.Fritsch, P.Hammann, G.L.A.Mislin, H.Tidow, I.J.Schalk. Nocardamine-Dependent Iron Uptake in Pseudomonas Aeruginosa : Exclusive Involvement of the Foxa Outer Membrane Transporter. Acs Chem.Biol. V. 15 2741 2020.
ISSN: ESSN 1554-8937
PubMed: 32902248
DOI: 10.1021/ACSCHEMBIO.0C00535
Page generated: Wed Aug 7 16:58:14 2024

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