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Iron in PDB 7a44: Co-Bound Sperm Whale Myoglobin Measured By Serial Synchrotron Crystallography

Protein crystallography data

The structure of Co-Bound Sperm Whale Myoglobin Measured By Serial Synchrotron Crystallography, PDB code: 7a44 was solved by P.Mehrabi, E.C.Schulz, R.Buecker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.47 / 1.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 37.9, 47.9, 83.5, 90, 90, 90
R / Rfree (%) 17.3 / 21

Iron Binding Sites:

The binding sites of Iron atom in the Co-Bound Sperm Whale Myoglobin Measured By Serial Synchrotron Crystallography (pdb code 7a44). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Co-Bound Sperm Whale Myoglobin Measured By Serial Synchrotron Crystallography, PDB code: 7a44:

Iron binding site 1 out of 1 in 7a44

Go back to Iron Binding Sites List in 7a44
Iron binding site 1 out of 1 in the Co-Bound Sperm Whale Myoglobin Measured By Serial Synchrotron Crystallography


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Co-Bound Sperm Whale Myoglobin Measured By Serial Synchrotron Crystallography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:16.6
occ:1.00
FE A:HEM201 0.0 16.6 1.0
C A:CMO203 1.5 23.3 1.0
NA A:HEM201 2.0 16.0 1.0
ND A:HEM201 2.0 16.7 1.0
NC A:HEM201 2.0 14.5 1.0
NB A:HEM201 2.0 16.5 1.0
NE2 A:HIS93 2.3 19.3 1.0
O A:CMO203 2.6 21.9 1.0
C1A A:HEM201 3.0 19.2 1.0
C4D A:HEM201 3.1 19.4 1.0
C4A A:HEM201 3.1 19.2 1.0
C4B A:HEM201 3.1 19.3 1.0
C1C A:HEM201 3.1 14.8 1.0
C1D A:HEM201 3.1 19.1 1.0
C4C A:HEM201 3.1 17.1 1.0
C1B A:HEM201 3.1 17.6 1.0
CE1 A:HIS93 3.2 20.3 1.0
CD2 A:HIS93 3.3 14.9 1.0
CHA A:HEM201 3.4 22.5 1.0
CHC A:HEM201 3.4 17.5 1.0
CHD A:HEM201 3.5 22.0 1.0
CHB A:HEM201 3.5 14.6 1.0
C2C A:HEM201 4.3 15.6 1.0
C2A A:HEM201 4.3 22.6 1.0
C3A A:HEM201 4.3 15.3 1.0
C3C A:HEM201 4.3 15.0 1.0
C2D A:HEM201 4.3 19.4 1.0
C3D A:HEM201 4.3 21.2 1.0
C3B A:HEM201 4.3 15.3 1.0
ND1 A:HIS93 4.3 19.0 1.0
C2B A:HEM201 4.4 17.2 1.0
CG A:HIS93 4.4 14.9 1.0
NE2 A:HIS64 4.6 22.6 1.0
CD2 A:HIS97 5.0 19.1 1.0
CG2 A:VAL68 5.0 26.2 1.0

Reference:

P.Mehrabi, R.Bucker, G.Bourenkov, H.M.Ginn, D.Von Stetten, H.M.Muller-Werkmeister, A.Kuo, T.Morizumi, B.T.Eger, W.L.Ou, S.Oghbaey, A.Sarracini, J.E.Besaw, O.Pare-Labrosse, S.Meier, H.Schikora, F.Tellkamp, A.Marx, D.A.Sherrell, D.Axford, R.L.Owen, O.P.Ernst, E.F.Pai, E.C.Schulz, R.J.D.Miller. Serial Femtosecond and Serial Synchrotron Crystallography Can Yield Data of Equivalent Quality: A Systematic Comparison. Sci Adv V. 7 2021.
ISSN: ESSN 2375-2548
PubMed: 33731353
DOI: 10.1126/SCIADV.ABF1380
Page generated: Wed Aug 7 21:42:32 2024

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