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Iron in PDB 7ate: Cytochrome C Oxidase Structure in P-State

Enzymatic activity of Cytochrome C Oxidase Structure in P-State

All present enzymatic activity of Cytochrome C Oxidase Structure in P-State:
7.1.1.9;

Other elements in 7ate:

The structure of Cytochrome C Oxidase Structure in P-State also contains other interesting chemical elements:

Calcium (Ca) 1 atom
Manganese (Mn) 1 atom
Copper (Cu) 3 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Cytochrome C Oxidase Structure in P-State (pdb code 7ate). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Cytochrome C Oxidase Structure in P-State, PDB code: 7ate:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 7ate

Go back to Iron Binding Sites List in 7ate
Iron binding site 1 out of 2 in the Cytochrome C Oxidase Structure in P-State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome C Oxidase Structure in P-State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe602

b:12.8
occ:1.00
FE A:HEA602 0.0 12.8 1.0
NA A:HEA602 2.1 12.8 1.0
NC A:HEA602 2.1 12.8 1.0
ND A:HEA602 2.1 12.8 1.0
NB A:HEA602 2.1 12.8 1.0
NE2 A:HIS413 2.2 9.3 1.0
NE2 A:HIS94 2.3 9.2 1.0
C4A A:HEA602 3.0 12.8 1.0
C1A A:HEA602 3.1 12.8 1.0
C1B A:HEA602 3.1 12.8 1.0
C1C A:HEA602 3.1 12.8 1.0
C4D A:HEA602 3.1 12.8 1.0
C4B A:HEA602 3.1 12.8 1.0
CD2 A:HIS413 3.1 9.3 1.0
C1D A:HEA602 3.1 12.8 1.0
C4C A:HEA602 3.1 12.8 1.0
CD2 A:HIS94 3.2 9.2 1.0
CE1 A:HIS413 3.2 9.3 1.0
CHB A:HEA602 3.3 12.8 1.0
CE1 A:HIS94 3.4 9.2 1.0
CHC A:HEA602 3.4 12.8 1.0
CHA A:HEA602 3.4 12.8 1.0
CHD A:HEA602 3.4 12.8 1.0
C3A A:HEA602 4.2 12.8 1.0
C2A A:HEA602 4.2 12.8 1.0
ND1 A:HIS413 4.3 9.3 1.0
CG A:HIS413 4.3 9.3 1.0
C3B A:HEA602 4.3 12.8 1.0
C2B A:HEA602 4.3 12.8 1.0
C2C A:HEA602 4.3 12.8 1.0
C3D A:HEA602 4.3 12.8 1.0
C3C A:HEA602 4.3 12.8 1.0
C2D A:HEA602 4.3 12.8 1.0
CG A:HIS94 4.4 9.2 1.0
ND1 A:HIS94 4.4 9.2 1.0
CG2 A:THR50 4.6 8.7 1.0

Iron binding site 2 out of 2 in 7ate

Go back to Iron Binding Sites List in 7ate
Iron binding site 2 out of 2 in the Cytochrome C Oxidase Structure in P-State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cytochrome C Oxidase Structure in P-State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe603

b:12.8
occ:1.00
FE A:HEA603 0.0 12.8 1.0
NC A:HEA603 2.1 12.8 1.0
NA A:HEA603 2.1 12.8 1.0
ND A:HEA603 2.1 12.8 1.0
NB A:HEA603 2.1 12.8 1.0
O1 A:PEO606 2.5 12.9 1.0
NE2 A:HIS411 2.5 9.9 1.0
O2 A:PEO606 2.9 12.9 1.0
C1C A:HEA603 3.0 12.8 1.0
C4A A:HEA603 3.1 12.8 1.0
C4B A:HEA603 3.1 12.8 1.0
C4C A:HEA603 3.1 12.8 1.0
C1B A:HEA603 3.1 12.8 1.0
C1A A:HEA603 3.1 12.8 1.0
C4D A:HEA603 3.1 12.8 1.0
C1D A:HEA603 3.1 12.8 1.0
CD2 A:HIS411 3.4 9.9 1.0
CHC A:HEA603 3.4 12.8 1.0
CHB A:HEA603 3.4 12.8 1.0
CHD A:HEA603 3.4 12.8 1.0
CHA A:HEA603 3.5 12.8 1.0
CE1 A:HIS411 3.5 9.9 1.0
C2C A:HEA603 4.2 12.8 1.0
C3A A:HEA603 4.3 12.8 1.0
C2A A:HEA603 4.3 12.8 1.0
C3C A:HEA603 4.3 12.8 1.0
C3B A:HEA603 4.3 12.8 1.0
C2B A:HEA603 4.3 12.8 1.0
C3D A:HEA603 4.3 12.8 1.0
C2D A:HEA603 4.3 12.8 1.0
CG A:HIS411 4.6 9.9 1.0
ND1 A:HIS411 4.6 9.9 1.0
CU A:CU604 4.7 22.1 1.0

Reference:

F.Kolbe, S.Safarian, H.Michel. Cytochrome C Oxidase Structure in P-State To Be Published.
Page generated: Wed Aug 7 23:11:53 2024

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