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Iron in PDB 7de0: Crystal Structure of FTMOX1 Y224F Mutation

Protein crystallography data

The structure of Crystal Structure of FTMOX1 Y224F Mutation, PDB code: 7de0 was solved by F.Wang, Y.Q.Gao, J.H.Gan, C.Y.Cao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.73 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.436, 136.74, 180.628, 90, 90, 90
R / Rfree (%) 21.6 / 26.3

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of FTMOX1 Y224F Mutation (pdb code 7de0). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Crystal Structure of FTMOX1 Y224F Mutation, PDB code: 7de0:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in 7de0

Go back to Iron Binding Sites List in 7de0
Iron binding site 1 out of 4 in the Crystal Structure of FTMOX1 Y224F Mutation


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of FTMOX1 Y224F Mutation within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe401

b:33.3
occ:1.00
NE2 B:HIS209 2.1 18.5 1.0
NE2 B:HIS133 2.2 20.0 1.0
O B:HOH510 2.2 28.9 1.0
OD1 B:ASP135 2.3 28.4 1.0
O B:HOH506 2.3 26.6 1.0
O B:HOH502 2.6 33.5 1.0
CE1 B:HIS133 2.9 23.5 1.0
CD2 B:HIS209 3.0 18.6 1.0
CG B:ASP135 3.1 23.7 1.0
CE1 B:HIS209 3.2 17.2 1.0
OD2 B:ASP135 3.2 25.9 1.0
CD2 B:HIS133 3.4 21.5 1.0
ND1 B:HIS133 4.1 19.4 1.0
CG B:HIS209 4.2 17.2 1.0
ND1 B:HIS209 4.3 16.6 1.0
CG B:HIS133 4.4 17.0 1.0
OE1 B:GLN130 4.5 33.1 1.0
CB B:ASP135 4.6 19.3 1.0
CA B:ASP135 5.0 17.2 1.0

Iron binding site 2 out of 4 in 7de0

Go back to Iron Binding Sites List in 7de0
Iron binding site 2 out of 4 in the Crystal Structure of FTMOX1 Y224F Mutation


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of FTMOX1 Y224F Mutation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe401

b:29.1
occ:1.00
NE2 A:HIS209 2.0 17.9 1.0
NE2 A:HIS133 2.0 21.0 1.0
O A:HOH505 2.2 25.8 1.0
OD1 A:ASP135 2.3 15.9 1.0
O A:HOH510 2.3 20.9 1.0
O A:HOH512 2.4 25.9 1.0
CE1 A:HIS133 2.6 20.5 1.0
CE1 A:HIS209 2.9 15.9 1.0
CD2 A:HIS209 3.0 19.9 1.0
CG A:ASP135 3.2 19.6 1.0
CD2 A:HIS133 3.3 28.3 1.0
OD2 A:ASP135 3.5 26.9 1.0
ND1 A:HIS133 3.9 18.1 1.0
ND1 A:HIS209 4.0 15.9 1.0
CG A:HIS209 4.1 16.4 1.0
CG A:HIS133 4.2 17.9 1.0
CB A:ASP135 4.7 15.7 1.0

Iron binding site 3 out of 4 in 7de0

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Iron binding site 3 out of 4 in the Crystal Structure of FTMOX1 Y224F Mutation


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Crystal Structure of FTMOX1 Y224F Mutation within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe401

b:32.4
occ:1.00
NE2 C:HIS133 2.0 20.7 1.0
NE2 C:HIS209 2.3 23.7 1.0
OD1 C:ASP135 2.3 29.0 1.0
CE1 C:HIS133 2.8 21.5 1.0
CD2 C:HIS133 3.2 20.2 1.0
CE1 C:HIS209 3.2 21.5 1.0
CG C:ASP135 3.2 23.6 1.0
CD2 C:HIS209 3.2 31.5 1.0
OD2 C:ASP135 3.4 21.1 1.0
ND1 C:HIS133 4.0 21.6 1.0
CG C:HIS133 4.2 20.8 1.0
ND1 C:HIS209 4.3 23.8 1.0
CG C:HIS209 4.4 29.2 1.0
CB C:ASP135 4.6 20.5 1.0
N C:ASP135 4.9 18.5 1.0
CA C:ASP135 5.0 18.1 1.0

Iron binding site 4 out of 4 in 7de0

Go back to Iron Binding Sites List in 7de0
Iron binding site 4 out of 4 in the Crystal Structure of FTMOX1 Y224F Mutation


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Crystal Structure of FTMOX1 Y224F Mutation within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe401

b:52.3
occ:1.00
NE2 D:HIS133 2.2 33.0 1.0
NE2 D:HIS209 2.3 54.7 1.0
OD1 D:ASP135 2.5 54.9 1.0
CE1 D:HIS209 2.8 53.8 1.0
CE1 D:HIS133 2.8 32.9 1.0
CG D:ASP135 3.4 44.6 1.0
CD2 D:HIS133 3.4 32.2 1.0
CD2 D:HIS209 3.4 47.0 1.0
OD2 D:ASP135 3.5 46.0 1.0
ND1 D:HIS209 3.9 49.8 1.0
ND1 D:HIS133 4.1 31.1 1.0
CG D:HIS209 4.2 40.8 1.0
CG D:HIS133 4.4 33.9 1.0
OE1 D:GLN130 4.7 61.4 1.0
CB D:ASP135 4.8 35.5 1.0

Reference:

F.Wang, Y.Q.Gao, J.H.Gan, C.Y.Cao. Crystal Structure of FTMOX1 Y224F Mutation To Be Published.
Page generated: Thu Aug 8 03:48:16 2024

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