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Iron in PDB 7dnz: Cryo-Em Structure of the Human ABCB6 (Hemin and Gsh-Bound)

Iron Binding Sites:

The binding sites of Iron atom in the Cryo-Em Structure of the Human ABCB6 (Hemin and Gsh-Bound) (pdb code 7dnz). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Cryo-Em Structure of the Human ABCB6 (Hemin and Gsh-Bound), PDB code: 7dnz:

Iron binding site 1 out of 1 in 7dnz

Go back to Iron Binding Sites List in 7dnz
Iron binding site 1 out of 1 in the Cryo-Em Structure of the Human ABCB6 (Hemin and Gsh-Bound)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of the Human ABCB6 (Hemin and Gsh-Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe901

b:105.6
occ:1.00
FE B:HEM901 0.0 105.6 1.0
ND B:HEM901 1.9 105.6 1.0
NA B:HEM901 2.0 105.6 1.0
NC B:HEM901 2.1 105.6 1.0
NB B:HEM901 2.1 105.6 1.0
C4D B:HEM901 2.8 105.6 1.0
C1D B:HEM901 2.9 105.6 1.0
C1A B:HEM901 2.9 105.6 1.0
C4C B:HEM901 3.0 105.6 1.0
C4A B:HEM901 3.0 105.6 1.0
C1B B:HEM901 3.1 105.6 1.0
C4B B:HEM901 3.1 105.6 1.0
C1C B:HEM901 3.1 105.6 1.0
SG2 A:GSH901 3.2 96.6 1.0
CHA B:HEM901 3.3 105.6 1.0
CHD B:HEM901 3.4 105.6 1.0
SG2 B:GSH902 3.4 96.6 1.0
CHB B:HEM901 3.5 105.6 1.0
CHC B:HEM901 3.5 105.6 1.0
C3D B:HEM901 4.1 105.6 1.0
C2D B:HEM901 4.1 105.6 1.0
C2A B:HEM901 4.2 105.6 1.0
C3A B:HEM901 4.2 105.6 1.0
C3C B:HEM901 4.3 105.6 1.0
C2C B:HEM901 4.3 105.6 1.0
C2B B:HEM901 4.3 105.6 1.0
C3B B:HEM901 4.3 105.6 1.0
CB2 A:GSH901 4.9 96.6 1.0

Reference:

S.Kim, S.S.Lee, J.G.Park, J.W.Kim, S.Ju, S.H.Choi, S.Kim, N.J.Kim, S.Hong, J.Y.Kang, M.S.Jin. Structural Insights Into Porphyrin Recognition By the Human Atp-Binding Cassette Transporter ABCB6. Mol.Cells V. 45 575 2022.
ISSN: ISSN 1016-8478
PubMed: 35950458
DOI: 10.14348/MOLCELLS.2022.0040
Page generated: Thu Aug 8 04:03:04 2024

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