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Iron in PDB 7jro: Plant Mitochondrial Complex IV From Vigna Radiata

Other elements in 7jro:

The structure of Plant Mitochondrial Complex IV From Vigna Radiata also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Zinc (Zn) 1 atom
Copper (Cu) 3 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Plant Mitochondrial Complex IV From Vigna Radiata (pdb code 7jro). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Plant Mitochondrial Complex IV From Vigna Radiata, PDB code: 7jro:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 7jro

Go back to Iron Binding Sites List in 7jro
Iron binding site 1 out of 2 in the Plant Mitochondrial Complex IV From Vigna Radiata


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Plant Mitochondrial Complex IV From Vigna Radiata within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Fe601

b:50.7
occ:1.00
FE a:HEA601 0.0 50.7 1.0
NA a:HEA601 2.0 50.7 1.0
NC a:HEA601 2.0 50.7 1.0
ND a:HEA601 2.0 50.7 1.0
NB a:HEA601 2.0 50.7 1.0
NE2 a:HIS378 2.4 20.9 1.0
C1D a:HEA601 3.0 50.7 1.0
C4A a:HEA601 3.0 50.7 1.0
C4B a:HEA601 3.0 50.7 1.0
C4D a:HEA601 3.0 50.7 1.0
C1A a:HEA601 3.0 50.7 1.0
C1C a:HEA601 3.0 50.7 1.0
C4C a:HEA601 3.0 50.7 1.0
C1B a:HEA601 3.0 50.7 1.0
CHD a:HEA601 3.3 50.7 1.0
CHC a:HEA601 3.3 50.7 1.0
CE1 a:HIS378 3.3 20.9 1.0
CHA a:HEA601 3.4 50.7 1.0
CHB a:HEA601 3.4 50.7 1.0
CD2 a:HIS378 3.5 20.9 1.0
C3A a:HEA601 4.2 50.7 1.0
C2C a:HEA601 4.2 50.7 1.0
C2A a:HEA601 4.2 50.7 1.0
C3C a:HEA601 4.2 50.7 1.0
C2B a:HEA601 4.2 50.7 1.0
C2D a:HEA601 4.2 50.7 1.0
C3B a:HEA601 4.3 50.7 1.0
C3D a:HEA601 4.3 50.7 1.0
ND1 a:HIS378 4.5 20.9 1.0
CE1 a:HIS292 4.6 29.8 1.0
CG a:HIS378 4.6 20.9 1.0
CU a:CU603 4.7 50.7 1.0

Iron binding site 2 out of 2 in 7jro

Go back to Iron Binding Sites List in 7jro
Iron binding site 2 out of 2 in the Plant Mitochondrial Complex IV From Vigna Radiata


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Plant Mitochondrial Complex IV From Vigna Radiata within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Fe602

b:50.7
occ:1.00
FE a:HEA602 0.0 50.7 1.0
NA a:HEA602 2.0 50.7 1.0
NC a:HEA602 2.0 50.7 1.0
ND a:HEA602 2.0 50.7 1.0
NB a:HEA602 2.0 50.7 1.0
NE2 a:HIS380 2.1 20.8 1.0
NE2 a:HIS64 2.2 19.5 1.0
CE1 a:HIS380 2.8 20.8 1.0
C1D a:HEA602 3.0 50.7 1.0
C4B a:HEA602 3.0 50.7 1.0
C4A a:HEA602 3.0 50.7 1.0
C1A a:HEA602 3.0 50.7 1.0
C4C a:HEA602 3.0 50.7 1.0
C1C a:HEA602 3.0 50.7 1.0
C4D a:HEA602 3.0 50.7 1.0
C1B a:HEA602 3.1 50.7 1.0
CE1 a:HIS64 3.1 19.5 1.0
CD2 a:HIS64 3.3 19.5 1.0
CD2 a:HIS380 3.3 20.8 1.0
CHC a:HEA602 3.4 50.7 1.0
CHD a:HEA602 3.4 50.7 1.0
CHA a:HEA602 3.4 50.7 1.0
CHB a:HEA602 3.4 50.7 1.0
ND1 a:HIS380 4.0 20.8 1.0
C2C a:HEA602 4.2 50.7 1.0
C3C a:HEA602 4.2 50.7 1.0
C2A a:HEA602 4.2 50.7 1.0
C3A a:HEA602 4.2 50.7 1.0
C2B a:HEA602 4.3 50.7 1.0
C2D a:HEA602 4.3 50.7 1.0
C3B a:HEA602 4.3 50.7 1.0
ND1 a:HIS64 4.3 19.5 1.0
CG a:HIS380 4.3 20.8 1.0
C3D a:HEA602 4.3 50.7 1.0
CG a:HIS64 4.4 19.5 1.0

Reference:

M.Maldonado, F.Guo, J.A.Letts. Atomic Structures of Respiratory Complex III2 , Complex IV and Supercomplex III2-IV From Vascular Plants To Be Published.
Page generated: Thu Aug 8 05:49:45 2024

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